Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   OM992_RS16155 Genome accession   NZ_CP110268
Coordinates   3125497..3127800 (-) Length   767 a.a.
NCBI ID   WP_188154513.1    Uniprot ID   A0AAE2NYB2
Organism   Bacillus siamensis strain YB-1631     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3120497..3132800
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OM992_RS16115 (OM992_16115) - 3120956..3121387 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  OM992_RS16120 (OM992_16120) - 3121387..3121728 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  OM992_RS16125 (OM992_16125) - 3121721..3123202 (+) 1482 WP_188154515.1 Na+/H+ antiporter subunit D -
  OM992_RS16130 (OM992_16130) - 3123208..3123684 (+) 477 WP_016938121.1 Na+/H+ antiporter subunit E -
  OM992_RS16135 (OM992_16135) - 3123684..3123968 (+) 285 WP_016938120.1 Na(+)/H(+) antiporter subunit F1 -
  OM992_RS16140 (OM992_16140) mnhG 3123952..3124326 (+) 375 WP_016938119.1 monovalent cation/H(+) antiporter subunit G -
  OM992_RS16145 (OM992_16145) - 3124366..3124749 (-) 384 WP_016938118.1 hotdog fold thioesterase -
  OM992_RS16150 (OM992_16150) comA 3124771..3125415 (-) 645 WP_049627264.1 response regulator transcription factor Regulator
  OM992_RS16155 (OM992_16155) comP 3125497..3127800 (-) 2304 WP_188154513.1 histidine kinase Regulator
  OM992_RS16160 (OM992_16160) comX 3127820..3127990 (-) 171 WP_003152048.1 competence pheromone ComX Regulator
  OM992_RS16165 (OM992_16165) comQ 3127953..3128939 (-) 987 WP_316936463.1 class 1 isoprenoid biosynthesis enzyme Regulator
  OM992_RS16170 (OM992_16170) degQ 3129070..3129210 (-) 141 WP_013353398.1 degradation enzyme regulation protein DegQ Regulator
  OM992_RS16175 (OM992_16175) - 3129676..3130017 (+) 342 WP_049627267.1 hypothetical protein -
  OM992_RS16180 (OM992_16180) - 3130022..3131245 (-) 1224 WP_264819056.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 767 a.a.        Molecular weight: 88979.35 Da        Isoelectric Point: 8.5625

>NTDB_id=753687 OM992_RS16155 WP_188154513.1 3125497..3127800(-) (comP) [Bacillus siamensis strain YB-1631]
MKKLIKPFTISIIILSVIYVCYVAFININGIIVGTKIVENKHKVFEVAEMSKTSYGKFVGLKQGDMIVKINNKKPSLKYL
KGDTLYHVKSLDIKRNGQQIHLDDFDIVNLNGYYSYFLFVLPLVFYFLSLICIFYIVKVSQTRKSIAGYVLILFLLDISI
AYMSAGGPSRGHEFNRYINLFTFIASPIFYLQFIQEYFKELGKKFANRLISFLYIIPIINLLNEPFRHIYSYDFTTNLNL
VSFFFVTLYAFISVFYHLYKFKYSEHAYILKILILTNTLSFSPFLLFYVIPIILTGSYILDALAAASLLVLIPLGLVYQF
VANKIFDIEFILGRMRYYGLLALVPALFIVGISAWFESIDIQMNPAQQTVFFFIVIFVIFYFKEVMDYKFRLKRFSEKFN
YQDSIFKYTQLIRSITSLKQMFKELKKTILDVLLVSKAYVFEVTSEGDILYHDKKDNEPDWEMYSKEFKKVTSEIGKIIE
LNRGFLIKIGERGGSSYVLLCLSAINTPRLTRDEISWLKTLSFYTSVSMENVIQIEELMNHLQDLKQQGSNPVWLKKLMF
TIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKREEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLG
LVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVG
CNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2304 bp        

>NTDB_id=753687 OM992_RS16155 WP_188154513.1 3125497..3127800(-) (comP) [Bacillus siamensis strain YB-1631]
TTGAAGAAGCTTATAAAGCCATTTACAATATCCATTATTATTTTAAGTGTTATCTATGTTTGTTATGTCGCTTTTATTAA
CATAAATGGAATTATTGTAGGCACGAAAATTGTAGAAAATAAACATAAAGTATTCGAAGTTGCTGAAATGTCAAAAACCT
CGTATGGAAAATTTGTAGGTTTAAAACAAGGTGATATGATTGTCAAAATTAATAATAAAAAACCATCTTTAAAATATCTA
AAAGGGGATACTCTCTATCACGTTAAGAGCTTAGATATAAAAAGAAATGGACAGCAAATTCATTTAGATGATTTTGATAT
TGTTAATTTAAATGGATACTACAGTTACTTTTTATTTGTCCTTCCCCTTGTATTTTATTTTTTGAGCTTAATTTGTATAT
TTTATATTGTAAAGGTGAGTCAAACCAGAAAATCGATAGCTGGGTATGTCCTAATTCTCTTCCTGTTAGATATCTCAATA
GCTTATATGAGTGCTGGTGGTCCCTCAAGAGGTCATGAATTTAACAGATATATAAATTTGTTTACCTTCATTGCCTCACC
TATATTTTATCTCCAGTTTATTCAAGAGTATTTCAAGGAATTAGGTAAAAAATTTGCCAATCGCTTGATTTCTTTTCTAT
ATATCATACCGATAATTAATCTCTTAAACGAACCGTTTCGACATATTTATTCATATGACTTCACAACAAATTTAAATTTA
GTATCGTTTTTCTTCGTGACTCTCTATGCATTTATATCTGTTTTCTATCATCTGTATAAATTCAAGTATTCAGAACATGC
TTATATTCTTAAGATTTTAATTTTAACAAACACGCTCTCTTTTTCGCCCTTTTTGCTTTTTTATGTAATCCCAATTATTT
TGACAGGAAGTTATATATTAGATGCGTTGGCAGCGGCATCCCTGCTCGTACTTATCCCATTGGGGTTGGTATACCAGTTC
GTAGCTAACAAAATTTTTGATATTGAATTCATTTTAGGCAGGATGAGGTACTATGGCTTGCTTGCCTTAGTTCCAGCCCT
TTTTATTGTTGGGATTTCAGCTTGGTTCGAGTCAATAGATATACAAATGAATCCTGCTCAGCAAACTGTATTTTTCTTTA
TTGTGATATTTGTCATCTTTTATTTTAAAGAAGTAATGGATTATAAATTTCGGTTAAAACGTTTTTCTGAAAAATTTAAT
TATCAAGATAGTATATTCAAATATACTCAGCTCATCAGAAGTATAACATCTTTAAAACAAATGTTTAAAGAACTAAAAAA
GACGATTCTGGATGTTCTCCTCGTCAGTAAAGCTTATGTCTTTGAAGTTACCTCTGAGGGTGACATATTATATCATGATA
AAAAGGATAACGAACCTGACTGGGAAATGTATTCAAAAGAATTTAAGAAAGTTACTTCAGAGATTGGGAAAATCATTGAG
CTAAACCGCGGTTTCTTAATCAAGATAGGAGAACGCGGGGGAAGTTCTTATGTTTTGCTTTGTTTGTCCGCCATTAATAC
ACCGAGACTGACACGGGATGAGATTTCATGGCTGAAAACATTGTCTTTCTATACGAGTGTCTCTATGGAAAACGTGATAC
AGATCGAAGAACTCATGAATCATTTACAAGACCTAAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATGTTT
ACGATCGAGGAAAAGCAGCGGTCGGATCTGGCCCGTGATCTGCATGATTCGGTGTTGCAGGATTTGATTTCTTTGAAGCG
CCAGTGTGAGCTGTTTCTGGCTGATTTTAAAAGAGAAGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGA
ATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTGGGT
CTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTT
TACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAATGCCATGAAGCATT
CACAGGCCAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGATGACGGGGTCGGG
TGCAATCAGGAAGAAGGCGGCGGACAGTCGATGAGCATGGGGCTTTCGGGCATTAAGGAGCGCGTCCGGGCGCTTGACGG
ACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(567-636)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

73.247

100

0.735