Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   QE150_RS02790 Genome accession   NZ_CP123993
Coordinates   417290..419335 (-) Length   681 a.a.
NCBI ID   WP_031993737.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain Ab4294     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 412290..424335
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QE150_RS02755 (QE150_02755) - 412773..413453 (+) 681 WP_000842362.1 outer membrane lipid asymmetry maintenance protein MlaD -
  QE150_RS02760 (QE150_02760) - 413480..414121 (+) 642 WP_001093907.1 ABC transporter substrate-binding protein -
  QE150_RS02765 (QE150_02765) - 414133..414420 (+) 288 WP_000250997.1 STAS domain-containing protein -
  QE150_RS02770 (QE150_02770) - 414491..415504 (-) 1014 WP_000888321.1 CorA family divalent cation transporter -
  QE150_RS02775 (QE150_02775) - 415662..416243 (+) 582 WP_001084310.1 TIGR00730 family Rossman fold protein -
  QE150_RS02780 (QE150_02780) - 416258..416659 (+) 402 WP_270901075.1 NUDIX domain-containing protein -
  QE150_RS02785 (QE150_02785) comF 416662..417297 (-) 636 WP_000472265.1 phosphoribosyltransferase family protein Machinery gene
  QE150_RS02790 (QE150_02790) recG 417290..419335 (-) 2046 WP_031993737.1 ATP-dependent DNA helicase RecG Machinery gene
  QE150_RS02795 (QE150_02795) - 419356..420171 (+) 816 WP_000547774.1 NAD(P)H-binding protein -
  QE150_RS02800 (QE150_02800) adeT2 420251..421237 (+) 987 WP_086263529.1 putative multidrug efflux protein AdeT2 -
  QE150_RS02805 (QE150_02805) plsB 421281..423851 (-) 2571 WP_000045410.1 glycerol-3-phosphate 1-O-acyltransferase PlsB -

Sequence

Protein


Download         Length: 681 a.a.        Molecular weight: 76497.10 Da        Isoelectric Point: 7.7343

>NTDB_id=753636 QE150_RS02790 WP_031993737.1 417290..419335(-) (recG) [Acinetobacter baumannii strain Ab4294]
MTSVHQLQGVGSASAALLEKLNIFTTDDLLFHLPRDYEDRSTIIPMNQLMVGRSYLLEGEVKSVDFPPGKRKSMAALIQD
EFGKVTLRFYHIYKNLTDKIKPGNRLRIFGEVRVGARGLELYHPEIQLINEHTPLPKTQLTAIYPSTDGLTQAKLREYVK
QALKHHSDALPELLPKQYTNGYALKEALHYIHEPPVDANMIQLAQGSHPAQQRLIFEELVAHQISLLTRRAYIRQIASPA
FPSSKVLAKKLLEALPFQMTNAQKRVSKEILNDLKQHQPMLRLVQGDVGAGKTLVAAVAACHALEADWQVALMAPTEILA
EQHYLNFKRWFEPLGITVAWLSGKQKGKARAHAEQQIKEGHAELIVGTHALFQDNVEFAKLGLVIIDEQHRFGVDQRLAL
RNKGTEQLTPHQLVMTATPIPRTLAMSAYGDLDTSIIDELPPGRTPIQTVTIPLDRREEVLHRIASNCREGKQAYWVCTL
VEQSETLDAQAAEATYQEMKERFPELNIGLVHGKMKADEKQAVMQAFKNNELQLLIATTVIEVGVDVPNASIMVIENAER
LGLSQLHQLRGRVGRGAKASFCVLLYKPPLSQNGQERLSILRESNDGFVIAEKDLELRGPGELLGTKQTGDMGFRVARLE
RDDHLLSQAHYVAQQVLKDYPEQADALLKRWLPEAPRYAYV

Nucleotide


Download         Length: 2046 bp        

>NTDB_id=753636 QE150_RS02790 WP_031993737.1 417290..419335(-) (recG) [Acinetobacter baumannii strain Ab4294]
ATGACTTCAGTCCATCAGTTACAAGGCGTTGGATCGGCTTCAGCAGCCCTACTCGAAAAACTAAATATTTTTACCACAGA
TGATTTGCTGTTTCATCTGCCCCGTGATTATGAAGATCGCAGTACCATTATTCCTATGAATCAATTGATGGTTGGTCGTA
GTTATTTACTCGAGGGTGAAGTCAAATCTGTTGATTTCCCTCCAGGTAAACGTAAATCTATGGCCGCATTAATACAAGAT
GAATTTGGTAAGGTGACTTTACGCTTTTATCATATTTATAAAAATTTAACCGACAAAATAAAACCTGGTAACCGTTTACG
TATTTTTGGTGAAGTTCGTGTAGGTGCACGAGGACTTGAGCTTTATCATCCAGAAATTCAACTTATTAATGAACATACCC
CCCTTCCAAAAACGCAGCTCACAGCAATTTATCCAAGTACCGATGGACTAACACAAGCTAAATTACGCGAATATGTTAAA
CAAGCGTTGAAACATCATAGTGATGCTTTACCCGAGTTACTCCCTAAACAATATACAAATGGGTATGCACTCAAAGAAGC
TTTACATTACATTCATGAGCCGCCAGTTGATGCCAATATGATCCAACTGGCTCAAGGCTCTCATCCTGCGCAGCAACGTC
TTATTTTTGAAGAGCTGGTCGCACATCAAATTAGTCTTCTCACTCGACGTGCTTATATTCGTCAAATTGCTTCACCTGCT
TTTCCGAGTAGTAAAGTGCTTGCAAAAAAGCTGCTAGAAGCTTTACCTTTTCAAATGACCAACGCACAAAAACGTGTATC
AAAAGAAATTTTAAACGACTTAAAACAACATCAACCTATGCTGCGTTTGGTACAAGGTGATGTAGGGGCTGGAAAAACTT
TAGTTGCAGCGGTTGCAGCATGTCATGCATTGGAAGCAGATTGGCAAGTTGCGTTAATGGCACCTACCGAAATTTTAGCA
GAGCAGCATTATTTAAATTTTAAACGCTGGTTTGAACCTTTAGGTATTACGGTAGCTTGGTTGTCGGGTAAACAAAAAGG
GAAAGCGCGGGCACACGCTGAGCAACAAATTAAAGAAGGCCATGCTGAACTGATCGTGGGCACCCATGCCTTATTTCAAG
ATAACGTTGAGTTTGCAAAACTAGGACTCGTGATTATTGATGAACAGCACCGATTCGGGGTCGATCAGCGATTAGCCTTA
CGCAATAAAGGCACCGAACAGCTCACCCCACATCAACTGGTCATGACTGCAACGCCAATTCCTAGAACACTGGCAATGAG
TGCTTATGGCGATTTAGATACATCGATTATTGATGAATTACCCCCAGGCCGAACTCCAATTCAGACCGTCACGATTCCGC
TAGATCGTCGTGAAGAAGTACTGCATCGAATTGCTTCAAACTGCCGAGAAGGCAAACAGGCCTACTGGGTATGTACTCTG
GTCGAACAGTCCGAAACTTTAGATGCTCAAGCCGCCGAAGCCACCTATCAAGAAATGAAAGAGCGCTTTCCTGAACTTAA
TATTGGTTTGGTTCATGGCAAAATGAAAGCCGATGAAAAACAGGCTGTCATGCAAGCATTTAAAAACAATGAACTACAAC
TACTAATTGCCACTACTGTTATTGAGGTTGGAGTAGATGTTCCCAATGCGTCAATTATGGTCATTGAGAATGCTGAACGA
TTAGGGCTTTCACAGCTACACCAATTACGAGGGCGTGTAGGACGAGGTGCAAAAGCCAGTTTTTGTGTTCTTCTCTATAA
ACCACCACTTTCACAAAATGGGCAAGAAAGACTTTCAATTTTAAGAGAAAGTAATGATGGCTTTGTTATTGCTGAAAAAG
ATCTTGAGCTAAGAGGCCCGGGTGAGTTATTAGGAACAAAACAAACAGGTGATATGGGTTTCCGTGTCGCACGTTTAGAG
CGAGATGATCATTTATTGAGTCAAGCACACTACGTTGCACAACAAGTTCTAAAAGATTACCCTGAGCAAGCTGATGCCTT
ATTGAAGCGCTGGCTTCCTGAAGCTCCTCGATACGCATATGTTTAA

Domains

Predicted by InterProScan.

Helicase conserved C-terminal domain (Helicase_C)

(466-576)

DEAD/DEAH box helicase (DEAD)

(262-422)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(605-663)

RecG wedge domain (RecG_wedge)

(7-163)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

49.925

98.238

0.49
  recG/mmsA Streptococcus pneumoniae R6

41.504

97.651

0.405
  recG/mmsA Streptococcus pneumoniae R36A

41.504

97.651

0.405
  recG Bacillus subtilis subsp. subtilis str. 168

38.574

100

0.389