Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   NOV96_RS02935 Genome accession   NZ_CP110141
Coordinates   576494..577138 (-) Length   214 a.a.
NCBI ID   WP_240016644.1    Uniprot ID   -
Organism   Streptococcus suis strain WUSS030     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 571494..582138
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NOV96_RS02915 (NOV96_02915) - 571790..572317 (+) 528 WP_004194600.1 VanZ family protein -
  NOV96_RS02925 (NOV96_02925) nadE 574089..574913 (-) 825 WP_004194617.1 ammonia-dependent NAD(+) synthetase -
  NOV96_RS02930 (NOV96_02930) - 574926..576386 (-) 1461 WP_004194619.1 nicotinate phosphoribosyltransferase -
  NOV96_RS02935 (NOV96_02935) cclA/cilC 576494..577138 (-) 645 WP_240016644.1 A24 family peptidase Machinery gene
  NOV96_RS02940 (NOV96_02940) - 577269..577823 (+) 555 WP_004194627.1 class I SAM-dependent methyltransferase -
  NOV96_RS02945 (NOV96_02945) - 577839..578618 (-) 780 WP_004194629.1 ABC transporter ATP-binding protein -
  NOV96_RS02950 (NOV96_02950) - 578751..580088 (+) 1338 WP_004194632.1 hemolysin family protein -
  NOV96_RS02955 (NOV96_02955) pflA 580209..581000 (+) 792 WP_240016645.1 pyruvate formate-lyase-activating protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24241.46 Da        Isoelectric Point: 8.6581

>NTDB_id=752651 NOV96_RS02935 WP_240016644.1 576494..577138(-) (cclA/cilC) [Streptococcus suis strain WUSS030]
MKTIILFFLGASIGSFLGLVIDRFPEQSIIAPSSHCKACKRRLKAWDLIPVLSQLSTKSKCRYCKAKIPYWYLGLEFLAG
LVVLLCHFQVLNLTETILILAGLVLTIYDIKHQEYPFAVWLIFTFIALILSQLNWLFCGFLLLAYLTEKWQINIGSGDFL
YLASLALICGFTELLWIIQISSLLGLLVFAIFKPKSIPYVPLLFLSSIPIILCI

Nucleotide


Download         Length: 645 bp        

>NTDB_id=752651 NOV96_RS02935 WP_240016644.1 576494..577138(-) (cclA/cilC) [Streptococcus suis strain WUSS030]
ATGAAGACAATTATCCTATTTTTCCTTGGAGCTTCTATCGGCTCCTTCTTGGGATTGGTCATCGACCGTTTCCCTGAACA
GTCCATTATCGCCCCCTCTAGTCACTGCAAGGCCTGCAAACGACGGCTCAAGGCATGGGACTTAATTCCAGTCCTATCCC
AGCTTTCGACAAAATCCAAATGCCGTTACTGCAAGGCGAAGATACCTTATTGGTATCTGGGACTAGAATTCTTAGCTGGT
CTAGTTGTCCTGCTCTGCCATTTTCAAGTCCTAAACCTAACCGAAACCATTCTCATCTTGGCAGGACTAGTTTTGACCAT
TTACGACATCAAACATCAGGAATATCCTTTTGCTGTCTGGCTCATTTTTACTTTTATTGCTCTGATACTCTCCCAGCTCA
ACTGGCTCTTCTGTGGCTTTTTACTCTTGGCCTATCTGACTGAAAAATGGCAAATCAATATTGGTTCTGGTGACTTTCTC
TATCTGGCAAGTTTGGCCTTAATATGTGGATTTACAGAACTCCTCTGGATTATCCAGATTAGTTCCCTCCTAGGGCTTCT
TGTCTTCGCCATTTTCAAACCCAAGTCTATTCCCTACGTACCACTCCTTTTTCTTTCAAGTATTCCTATCATTCTGTGCA
TCTAA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(9-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis SK321

49.528

99.065

0.491
  cclA/cilC Streptococcus pneumoniae Rx1

49.029

96.262

0.472
  cclA/cilC Streptococcus pneumoniae D39

49.029

96.262

0.472
  cclA/cilC Streptococcus pneumoniae R6

49.029

96.262

0.472
  cclA/cilC Streptococcus pneumoniae TIGR4

47.17

99.065

0.467
  cclA/cilC Streptococcus mitis NCTC 12261

45.755

99.065

0.453