Detailed information NTG0752410

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: D3P44_RS03225
• Genome accession: NZ_CP110110
• Coordinates: 690689..692026 (-)
• Length: 445 a.a.
• NCBI ID: WP_200293709.1
• Uniprot ID: A0A9X7YUA2
• Organism: Stutzerimonas balearica strain Z8
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 685689..697026

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D3P44_RS03210 (D3P44_003210)	-	685718..687682 (-)	1965	WP_212542491.1	methyl-accepting chemotaxis protein	-
D3P44_RS03215 (D3P44_003215)	-	687804..689399 (-)	1596	WP_212542492.1	diguanylate cyclase	-
D3P44_RS03220 (D3P44_003220)	-	689592..690644 (+)	1053	WP_041107889.1	DUF2333 family protein	-
D3P44_RS03225 (D3P44_003225)	pilR	690689..692026 (-)	1338	WP_200293709.1	sigma-54-dependent transcriptional regulator	Regulator
D3P44_RS03230 (D3P44_003230)	pilS	692134..693726 (-)	1593	WP_061336966.1	sensor histidine kinase	Regulator
D3P44_RS03235 (D3P44_003235)	-	693716..693949 (-)	234	WP_043218531.1	PP0621 family protein	-
D3P44_RS03240 (D3P44_003240)	-	694030..695022 (-)	993	WP_041107883.1	outer membrane protein assembly factor BamD	-
D3P44_RS03245 (D3P44_003245)	rluD	695170..696144 (+)	975	WP_041107881.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
D3P44_RS03250 (D3P44_003250)	pgeF	696141..696872 (+)	732	WP_212542493.1	peptidoglycan editing factor PgeF	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49669.07 Da
• Isoelectric Point: 5.7877

>NTDB_id=752410 D3P44_RS03225 WP_200293709.1 690689..692026(-) (pilR) [Stutzerimonas balearica strain Z8]
MSARQKALIIDDEPDIRELLEITLGRMKLDTRSARSVKEARECLSREHYDLCLTDMRLPDGSGLELVQHIQQQYPHLPVA
MITAYGSLDTAISALKAGAFDFVTKPVDLNRLRELVSTALRLRPSTPEVPSDSRLLGNSPPMETLRKQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGARAERPFVPVNCGAIPSELMESEFFGHKKGSFSGAIEDKPGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRVVGGAQEVMVDVRILCATHKDLASEVAAGRFRQDLYYRLNVIELRVPPLRERREDIGLLADVM
LKRLAAECGEPPARLTADALAKLESYRFPGNVRELENMLERAYTLCEDDQIKADDLRLAEAVPAADGQENNLAQIDNLED
HLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGLD

Nucleotide

• Length: 1338 bp

>NTDB_id=752410 D3P44_RS03225 WP_200293709.1 690689..692026(-) (pilR) [Stutzerimonas balearica strain Z8]
ATGAGCGCCCGCCAGAAAGCCCTGATCATCGATGACGAACCCGATATCCGCGAACTGCTGGAGATCACCCTAGGGCGCAT
GAAGCTCGACACGCGCAGCGCCCGCAGCGTCAAGGAGGCGCGCGAGTGCCTCAGCCGCGAGCATTACGACCTGTGCCTGA
CCGATATGCGCCTGCCCGACGGCTCCGGCCTGGAACTGGTACAGCACATACAGCAGCAGTACCCGCATCTGCCGGTCGCG
ATGATCACCGCGTACGGCAGCCTCGATACGGCAATCAGCGCACTGAAAGCGGGCGCTTTCGACTTCGTCACCAAACCGGT
GGATCTCAACCGTCTGCGCGAGCTCGTCAGCACGGCACTGCGCCTGCGCCCAAGCACCCCGGAAGTACCCAGCGACAGTC
GCCTGCTGGGCAACTCGCCGCCGATGGAGACGCTGCGCAAGCAGATCGGCAAGCTCGCCCGCAGTCAGGCTCCGGTGTAT
ATCAGCGGCGAGTCCGGCAGCGGCAAGGAGCTGGTCGCGCGGCTGATCCACGAGCAGGGCGCACGCGCAGAGCGGCCTTT
CGTCCCGGTCAACTGCGGTGCGATCCCATCGGAGCTGATGGAGAGCGAGTTCTTCGGACACAAGAAAGGCAGCTTCAGCG
GCGCCATCGAGGACAAGCCGGGGCTGTTCCAGGCCGCCAATGGCGGCACGCTGTTCCTCGACGAGGTCGCCGACCTGCCT
TTACCCATGCAGGTCAAGCTGCTGCGCGCGATCCAGGAAAAAGCCGTGCGCGTGGTTGGCGGCGCTCAGGAGGTCATGGT
CGATGTGCGCATCCTCTGCGCCACGCACAAGGATCTCGCCAGCGAAGTGGCGGCCGGGCGCTTCCGCCAGGACCTCTATT
ACCGCCTGAACGTCATCGAACTGCGCGTGCCGCCGCTGCGCGAGCGTCGCGAAGACATCGGTTTGCTGGCCGACGTAATG
CTCAAGCGCCTGGCGGCCGAGTGCGGCGAGCCGCCGGCACGGCTGACAGCCGATGCACTGGCCAAGCTGGAGAGTTATCG
CTTCCCCGGCAACGTCCGCGAACTGGAAAACATGCTCGAGCGCGCCTACACGCTTTGCGAAGACGACCAGATCAAGGCCG
ACGACCTGCGCCTGGCCGAGGCGGTGCCGGCAGCCGACGGCCAGGAGAACAACCTGGCGCAGATCGACAACCTGGAAGAC
CATCTGGAAGAGATCGAACGCAAACTGATCATGCAGGCGCTGGAGGAGACGCGCTGGAACCGCACCGCCGCCGCACAGCG
CCTGGGGCTGACTTTCCGCTCGATGCGCTACCGGCTGAAAAAGCTCGGCCTAGATTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

• Sigma-54 interaction domain (Sigma54_activat) (135-301)

• Response regulator receiver domain (Response_reg) (8-116)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	83.784	99.775	0.836
pilR	Acinetobacter baumannii strain A118	50.98	100	0.526
luxO	Vibrio cholerae strain A1552	36.689	100	0.369