Detailed information NTG0749637

Bioinformatically predicted

Overview

• Name: ssb
• Type: Machinery gene
• Locus tag: OHY99_RS05340
• Genome accession: NZ_CP109824
• Coordinates: 1123179..1123646 (-)
• Length: 155 a.a.
• NCBI ID: WP_264383826.1
• Uniprot ID: -
• Organism: Serratia marcescens strain SMBC31
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1118179..1128646

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHY99_RS05285 (OHY99_05285)	-	1118398..1119096 (-)	699	WP_264383818.1	DUF551 domain-containing protein	-
OHY99_RS05290 (OHY99_05290)	-	1119093..1119392 (-)	300	WP_004954277.1	hypothetical protein	-
OHY99_RS05295 (OHY99_05295)	-	1119393..1119821 (-)	429	WP_264383819.1	ead/Ea22-like family protein	-
OHY99_RS05300 (OHY99_05300)	-	1119825..1120085 (-)	261	WP_264383820.1	hypothetical protein	-
OHY99_RS05305 (OHY99_05305)	-	1120075..1120260 (-)	186	WP_130054868.1	hypothetical protein	-
OHY99_RS05310 (OHY99_05310)	-	1120257..1120457 (-)	201	WP_197666068.1	hypothetical protein	-
OHY99_RS05315 (OHY99_05315)	-	1120454..1120741 (-)	288	WP_264383821.1	hypothetical protein	-
OHY99_RS05320 (OHY99_05320)	-	1120957..1121298 (-)	342	WP_264383822.1	hypothetical protein	-
OHY99_RS05325 (OHY99_05325)	-	1121285..1121821 (-)	537	WP_264383823.1	SAM-dependent methyltransferase	-
OHY99_RS05330 (OHY99_05330)	-	1121818..1122198 (-)	381	WP_264383824.1	hypothetical protein	-
OHY99_RS05335 (OHY99_05335)	-	1122383..1122715 (-)	333	WP_264383825.1	hypothetical protein	-
OHY99_RS05340 (OHY99_05340)	ssb	1123179..1123646 (-)	468	WP_264383826.1	single-stranded DNA-binding protein	Machinery gene
OHY99_RS05345 (OHY99_05345)	-	1123646..1124518 (-)	873	WP_264383827.1	ATP-binding protein	-
OHY99_RS05350 (OHY99_05350)	-	1124528..1124695 (-)	168	WP_264383828.1	hypothetical protein	-
OHY99_RS05355 (OHY99_05355)	-	1124692..1124892 (-)	201	WP_042784842.1	hypothetical protein	-
OHY99_RS05360 (OHY99_05360)	-	1124996..1125130 (-)	135	WP_020827381.1	protease FtsH-inhibitory lysogeny factor CIII	-
OHY99_RS05365 (OHY99_05365)	-	1125283..1125681 (-)	399	WP_264383829.1	hypothetical protein	-
OHY99_RS05370 (OHY99_05370)	-	1125784..1125912 (-)	129	WP_264383830.1	hypothetical protein	-
OHY99_RS05375 (OHY99_05375)	-	1126091..1126339 (-)	249	WP_264383831.1	hypothetical protein	-
OHY99_RS05380 (OHY99_05380)	-	1127181..1127774 (-)	594	WP_264383832.1	hypothetical protein	-

Sequence

Protein

• Length: 155 a.a.
• Molecular weight: 17317.30 Da
• Isoelectric Point: 7.2027

>NTDB_id=749637 OHY99_RS05340 WP_264383826.1 1123179..1123646(-) (ssb) [Serratia marcescens strain SMBC31]
MASRGVNKMILLGNLGKDPEVRYTQNGGAIANLTIATSESWRDKQSGEQKEKTEWHRVVLFGKLAEIAGEYLRKGSQVYI
EGKLTTRKWEDQAGVERYTTEIHVNVGGVMQMIGSRQDGSSQNGGPSDKQQQQSRQPAAQKNDPPMNFDDYDIPF

Nucleotide

• Length: 468 bp

>NTDB_id=749637 OHY99_RS05340 WP_264383826.1 1123179..1123646(-) (ssb) [Serratia marcescens strain SMBC31]
ATGGCAAGTCGTGGCGTTAACAAAATGATTTTACTTGGCAACCTTGGGAAAGATCCAGAGGTTCGCTACACGCAAAATGG
TGGAGCAATCGCCAACCTGACGATTGCCACCTCTGAATCGTGGCGTGATAAACAATCTGGCGAGCAAAAGGAGAAGACTG
AATGGCACCGCGTGGTGCTGTTTGGAAAGTTGGCTGAAATTGCCGGTGAGTATCTTCGAAAAGGCTCGCAGGTTTATATC
GAAGGAAAACTGACAACGCGCAAGTGGGAAGATCAGGCTGGAGTCGAGCGCTATACGACAGAGATTCATGTCAATGTCGG
CGGCGTGATGCAGATGATTGGTAGCCGTCAGGATGGTTCATCTCAAAATGGCGGCCCTAGCGACAAGCAGCAGCAACAAA
GTCGCCAGCCAGCAGCGCAGAAAAACGATCCACCGATGAACTTCGATGATTATGACATCCCTTTCTAG

Domains

Predicted by InterProScan.

• Single-strand binding protein family (SSB) (6-105)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssb	Vibrio cholerae strain A1552	61.236	100	0.703
ssb	Glaesserella parasuis strain SC1401	48.901	100	0.574
ssb	Neisseria gonorrhoeae MS11	41.573	100	0.477
ssb	Neisseria meningitidis MC58	40.909	100	0.465