Detailed information
Bioinformatically predicted
Overview
| Name | ideA | Type | Regulator |
| Locus tag | OI982_RS15775 | Genome accession | NZ_CP109733 |
| Coordinates | 3330087..3330761 (-) | Length | 224 a.a. |
| NCBI ID | WP_141173068.1 | Uniprot ID | - |
| Organism | Providencia stuartii strain 2017-45-35 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 3264835..3334079 | 3330087..3330761 | within | 0 |
Gene organization within MGE regions
Location: 3264835..3334079
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OI982_RS15525 (OI982_15660) | - | 3265017..3265427 (+) | 411 | WP_004926599.1 | DNA polymerase III subunit psi | - |
| OI982_RS15530 (OI982_15665) | rimI | 3265396..3265848 (+) | 453 | WP_141173564.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| OI982_RS15535 (OI982_15670) | - | 3265928..3266980 (-) | 1053 | WP_072502538.1 | hypothetical protein | - |
| OI982_RS15540 (OI982_15675) | - | 3267192..3268760 (-) | 1569 | WP_004926609.1 | BCCT family transporter | - |
| OI982_RS15545 (OI982_15680) | - | 3269052..3270179 (+) | 1128 | WP_014656833.1 | aromatic ring-hydroxylating oxygenase subunit alpha | - |
| OI982_RS15550 (OI982_15685) | - | 3270195..3271643 (+) | 1449 | WP_040132764.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| OI982_RS15555 (OI982_15690) | - | 3271672..3272625 (+) | 954 | WP_004926619.1 | PDR/VanB family oxidoreductase | - |
| OI982_RS15560 (OI982_15695) | - | 3272658..3273557 (-) | 900 | WP_004926622.1 | helix-turn-helix domain-containing protein | - |
| OI982_RS15565 (OI982_15700) | - | 3273579..3274502 (-) | 924 | WP_004926625.1 | LysR substrate-binding domain-containing protein | - |
| OI982_RS15570 (OI982_15705) | - | 3274611..3275678 (+) | 1068 | WP_004926627.1 | tartrate dehydrogenase | - |
| OI982_RS15575 (OI982_15710) | - | 3276808..3277119 (+) | 312 | WP_141173562.1 | helix-turn-helix domain-containing protein | - |
| OI982_RS15580 (OI982_15715) | - | 3277112..3278326 (+) | 1215 | WP_141173561.1 | type II toxin-antitoxin system HipA family toxin | - |
| OI982_RS22765 (OI982_15720) | - | 3278552..3278746 (+) | 195 | WP_000127614.1 | helix-turn-helix transcriptional regulator | - |
| OI982_RS15585 (OI982_15725) | - | 3278758..3280007 (-) | 1250 | Protein_3068 | tyrosine-type recombinase/integrase | - |
| OI982_RS15590 (OI982_15730) | - | 3280009..3280278 (-) | 270 | WP_141173560.1 | hypothetical protein | - |
| OI982_RS15595 (OI982_15735) | - | 3280281..3281255 (-) | 975 | WP_141173559.1 | ParM/StbA family protein | - |
| OI982_RS15600 (OI982_15740) | mobI | 3281720..3282118 (+) | 399 | WP_141173558.1 | conjugative transfer protein MobI(A/C) | - |
| OI982_RS15605 (OI982_15745) | umuC | 3282174..3283442 (-) | 1269 | WP_141173557.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| OI982_RS15610 (OI982_15750) | umuD | 3283450..3283899 (-) | 450 | WP_141173556.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| OI982_RS15615 (OI982_15755) | - | 3284548..3285453 (+) | 906 | WP_164456988.1 | 3'-5' exonuclease | - |
| OI982_RS15620 (OI982_15760) | - | 3285526..3285792 (-) | 267 | WP_250170576.1 | hypothetical protein | - |
| OI982_RS15625 (OI982_15765) | - | 3285724..3285966 (+) | 243 | WP_284659609.1 | hypothetical protein | - |
| OI982_RS22770 (OI982_15770) | - | 3286250..3286414 (-) | 165 | WP_232074442.1 | hypothetical protein | - |
| OI982_RS15630 (OI982_15775) | - | 3286446..3287237 (+) | 792 | WP_282555071.1 | WYL domain-containing protein | - |
| OI982_RS15635 (OI982_15780) | - | 3287342..3290227 (+) | 2886 | WP_197742364.1 | DEAD/DEAH box helicase | - |
| OI982_RS15640 (OI982_15785) | - | 3290230..3295089 (+) | 4860 | WP_141173552.1 | Eco57I restriction-modification methylase domain-containing protein | - |
| OI982_RS15645 (OI982_15790) | - | 3295253..3301675 (+) | 6423 | WP_284659468.1 | DEAD/DEAH box helicase | - |
| OI982_RS15650 (OI982_15795) | - | 3301690..3303816 (+) | 2127 | WP_206093044.1 | UvrD-helicase domain-containing protein | - |
| OI982_RS15655 (OI982_15800) | mobH | 3304065..3306215 (+) | 2151 | WP_141173549.1 | MobH family relaxase | - |
| OI982_RS15660 (OI982_15805) | traD | 3306263..3308083 (+) | 1821 | WP_141173548.1 | conjugative transfer system coupling protein TraD | - |
| OI982_RS15665 (OI982_15810) | - | 3308093..3308329 (+) | 237 | Protein_3085 | conjugative transfer protein | - |
| OI982_RS15670 (OI982_15815) | - | 3308380..3309288 (+) | 909 | WP_061064139.1 | IS481 family transposase | - |
| OI982_RS15675 (OI982_15820) | - | 3309345..3310040 (+) | 696 | Protein_3087 | Fic family protein | - |
| OI982_RS15680 (OI982_15825) | - | 3310242..3310532 (-) | 291 | WP_141173078.1 | HigA family addiction module antitoxin | - |
| OI982_RS15685 (OI982_15830) | traL | 3310766..3311047 (+) | 282 | WP_000433889.1 | type IV conjugative transfer system protein TraL | - |
| OI982_RS15690 (OI982_15835) | - | 3311044..3311670 (+) | 627 | WP_141173077.1 | TraE/TraK family type IV conjugative transfer system protein | - |
| OI982_RS15695 (OI982_15840) | - | 3311651..3312550 (+) | 900 | WP_404935943.1 | TraK domain-containing protein | - |
| OI982_RS15700 (OI982_15845) | - | 3312553..3313842 (+) | 1290 | WP_141173076.1 | TraB/VirB10 family protein | - |
| OI982_RS22775 | traV | 3313917..3314489 (+) | 573 | Protein_3093 | type IV conjugative transfer system lipoprotein TraV | - |
| OI982_RS15710 (OI982_15860) | traA | 3314486..3314872 (+) | 387 | WP_141173075.1 | TraA family conjugative transfer protein | - |
| OI982_RS15715 (OI982_15865) | - | 3315092..3315883 (+) | 792 | WP_141173081.1 | type IV toxin-antitoxin system AbiEi family antitoxin | - |
| OI982_RS15720 (OI982_15870) | - | 3315876..3316739 (+) | 864 | WP_284659469.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| OI982_RS15725 (OI982_15875) | - | 3316946..3317638 (+) | 693 | WP_141173073.1 | DsbC family protein | - |
| OI982_RS15730 (OI982_15880) | traC | 3317638..3320037 (+) | 2400 | Protein_3098 | type IV secretion system protein TraC | - |
| OI982_RS15735 (OI982_15885) | - | 3320030..3320377 (+) | 348 | WP_141173072.1 | plasmid-related protein | - |
| OI982_RS15740 (OI982_15890) | - | 3320361..3320873 (+) | 513 | WP_169636932.1 | S26 family signal peptidase | - |
| OI982_RS15745 (OI982_15895) | - | 3320881..3322008 (+) | 1128 | WP_232074373.1 | TrbC family F-type conjugative pilus assembly protein | - |
| OI982_RS15750 (OI982_15900) | - | 3321992..3323020 (+) | 1029 | WP_012368375.1 | TraU family protein | - |
| OI982_RS15755 (OI982_15905) | traN | 3323023..3326715 (+) | 3693 | WP_141173070.1 | conjugal transfer protein TraN | - |
| OI982_RS15760 (OI982_15910) | - | 3326957..3327205 (+) | 249 | WP_164456986.1 | hypothetical protein | - |
| OI982_RS15765 (OI982_15915) | - | 3327215..3329488 (+) | 2274 | WP_284659470.1 | dynamin family protein | - |
| OI982_RS15770 (OI982_15920) | - | 3329508..3330026 (+) | 519 | WP_052921257.1 | hypothetical protein | - |
| OI982_RS15775 (OI982_15925) | ideA | 3330087..3330761 (-) | 675 | WP_141173068.1 | endonuclease | Regulator |
| OI982_RS15780 (OI982_15930) | - | 3330873..3331475 (-) | 603 | WP_141173067.1 | hypothetical protein | - |
| OI982_RS15785 (OI982_15935) | - | 3331843..3332169 (+) | 327 | WP_141173066.1 | plasmid-related protein | - |
| OI982_RS15790 (OI982_15940) | - | 3332185..3332604 (+) | 420 | WP_141173065.1 | single-stranded DNA-binding protein | - |
| OI982_RS15795 (OI982_15945) | bet | 3332684..3333502 (+) | 819 | WP_000414662.1 | phage recombination protein Bet | - |
| OI982_RS15800 (OI982_15950) | - | 3333584..3333727 (+) | 144 | WP_164456985.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 224 a.a. Molecular weight: 26210.21 Da Isoelectric Point: 7.3260
>NTDB_id=748915 OI982_RS15775 WP_141173068.1 3330087..3330761(-) (ideA) [Providencia stuartii strain 2017-45-35]
MNRTNFLVTFLIALFALPAFAEHPTSFSQAKRFAREIYQDNQSTFYCGCSYSNDGAIDAASCGYEPRKQPKQGERLEWEH
VVSAWEIGHQRQCWQNGGRRNCERNDPEFSKMVSDLHNLVPSVGELNGDRSNFRFGMIPNEPRAYGQCDFEVDFKDRRAE
PPANRQGDIARIYFYMRDQYGLRLSRQQTQLFEAWSRMDPVDEWEITRDNRIKALQGNKNHHIK
MNRTNFLVTFLIALFALPAFAEHPTSFSQAKRFAREIYQDNQSTFYCGCSYSNDGAIDAASCGYEPRKQPKQGERLEWEH
VVSAWEIGHQRQCWQNGGRRNCERNDPEFSKMVSDLHNLVPSVGELNGDRSNFRFGMIPNEPRAYGQCDFEVDFKDRRAE
PPANRQGDIARIYFYMRDQYGLRLSRQQTQLFEAWSRMDPVDEWEITRDNRIKALQGNKNHHIK
Nucleotide
Download Length: 675 bp
>NTDB_id=748915 OI982_RS15775 WP_141173068.1 3330087..3330761(-) (ideA) [Providencia stuartii strain 2017-45-35]
ATGAATAGAACTAATTTTCTCGTTACTTTCTTGATAGCGTTGTTCGCGCTACCTGCATTTGCAGAACACCCAACATCGTT
CAGTCAGGCAAAACGATTTGCCCGAGAAATTTACCAAGACAACCAAAGTACGTTTTACTGTGGATGTAGCTATAGCAATG
ATGGTGCGATTGATGCTGCATCTTGCGGATATGAACCAAGGAAGCAACCGAAACAAGGTGAACGCTTAGAGTGGGAGCAT
GTTGTCTCAGCATGGGAAATTGGCCATCAACGCCAATGCTGGCAAAACGGTGGACGTCGGAACTGTGAAAGGAATGATCC
TGAGTTTTCTAAAATGGTTTCGGATCTCCATAACCTCGTACCATCAGTAGGAGAGCTCAACGGGGATAGATCAAATTTTC
GATTTGGCATGATCCCGAACGAACCAAGGGCCTATGGTCAATGTGATTTCGAAGTTGATTTCAAAGACCGCCGAGCAGAA
CCACCAGCTAACCGTCAGGGTGATATTGCTAGAATTTATTTCTACATGCGAGATCAATACGGCCTAAGACTAAGCAGGCA
ACAAACTCAACTATTTGAAGCTTGGTCAAGAATGGACCCTGTTGATGAATGGGAAATTACACGAGACAATCGAATTAAAG
CCTTACAAGGCAATAAAAACCACCATATAAAATAG
ATGAATAGAACTAATTTTCTCGTTACTTTCTTGATAGCGTTGTTCGCGCTACCTGCATTTGCAGAACACCCAACATCGTT
CAGTCAGGCAAAACGATTTGCCCGAGAAATTTACCAAGACAACCAAAGTACGTTTTACTGTGGATGTAGCTATAGCAATG
ATGGTGCGATTGATGCTGCATCTTGCGGATATGAACCAAGGAAGCAACCGAAACAAGGTGAACGCTTAGAGTGGGAGCAT
GTTGTCTCAGCATGGGAAATTGGCCATCAACGCCAATGCTGGCAAAACGGTGGACGTCGGAACTGTGAAAGGAATGATCC
TGAGTTTTCTAAAATGGTTTCGGATCTCCATAACCTCGTACCATCAGTAGGAGAGCTCAACGGGGATAGATCAAATTTTC
GATTTGGCATGATCCCGAACGAACCAAGGGCCTATGGTCAATGTGATTTCGAAGTTGATTTCAAAGACCGCCGAGCAGAA
CCACCAGCTAACCGTCAGGGTGATATTGCTAGAATTTATTTCTACATGCGAGATCAATACGGCCTAAGACTAAGCAGGCA
ACAAACTCAACTATTTGAAGCTTGGTCAAGAATGGACCCTGTTGATGAATGGGAAATTACACGAGACAATCGAATTAAAG
CCTTACAAGGCAATAAAAACCACCATATAAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ideA | Vibrio cholerae O1 str. 2010EL-1786 |
92.825 |
99.554 |
0.924 |
| dns | Vibrio parahaemolyticus RIMD 2210633 |
52.655 |
100 |
0.531 |
| dns | Aliivibrio fischeri ES114 |
51.316 |
100 |
0.522 |
| dns | Vibrio cholerae strain A1552 |
51.802 |
99.107 |
0.513 |
| dns | Campylobacter jejuni RM1221 |
37.054 |
100 |
0.371 |