Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | FYK59_RS00480 | Genome accession | NZ_AP019853 |
| Coordinates | 105578..106123 (-) | Length | 181 a.a. |
| NCBI ID | WP_003692554.1 | Uniprot ID | Q5FAD1 |
| Organism | Neisseria gonorrhoeae strain SS3160 | ||
| Function | pseudopilus extrusion and retraction (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 100578..111123
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYK59_RS00470 (NGSS3160_00870) | - | 101584..102096 (-) | 513 | WP_003687349.1 | shikimate kinase | - |
| FYK59_RS00475 (NGSS3160_00880) | pilQ | 103364..105559 (-) | 2196 | WP_003687350.1 | type IV pilus secretin PilQ | Machinery gene |
| FYK59_RS00480 (NGSS3160_00890) | pilP | 105578..106123 (-) | 546 | WP_003692554.1 | pilus assembly protein PilP | Machinery gene |
| FYK59_RS00485 (NGSS3160_00900) | - | 106141..106788 (-) | 648 | WP_003690570.1 | type 4a pilus biogenesis protein PilO | - |
| FYK59_RS00490 (NGSS3160_00910) | pilN | 106789..107388 (-) | 600 | WP_047926976.1 | PilN domain-containing protein | Machinery gene |
| FYK59_RS00495 (NGSS3160_00920) | pilM | 107391..108506 (-) | 1116 | WP_003696683.1 | type IV pilus biogenesis protein PilM | - |
| FYK59_RS00500 (NGSS3160_00930) | - | 108658..111054 (+) | 2397 | WP_003690571.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 181 a.a. Molecular weight: 20094.62 Da Isoelectric Point: 4.7529
>NTDB_id=74419 FYK59_RS00480 WP_003692554.1 105578..106123(-) (pilP) [Neisseria gonorrhoeae strain SS3160]
MKHYALLISFLALSACSQNSEDLNEWMAQTRREAKAEIIPFQAPTLPVAPVYSPPQLTGPNAFDFRRMETAKKGENAPDT
KRIKETLEKFSLENMRYVGILKSGQKVSGFIEAEGYVYTVGVGNYLGQNYGRIESITDDSIILNELIEDSTGNWVSRKAE
LLLNSSDKNTEQAAAPAAEQN
MKHYALLISFLALSACSQNSEDLNEWMAQTRREAKAEIIPFQAPTLPVAPVYSPPQLTGPNAFDFRRMETAKKGENAPDT
KRIKETLEKFSLENMRYVGILKSGQKVSGFIEAEGYVYTVGVGNYLGQNYGRIESITDDSIILNELIEDSTGNWVSRKAE
LLLNSSDKNTEQAAAPAAEQN
Nucleotide
Download Length: 546 bp
>NTDB_id=74419 FYK59_RS00480 WP_003692554.1 105578..106123(-) (pilP) [Neisseria gonorrhoeae strain SS3160]
ATGAAACACTATGCCTTACTCATCAGCTTTCTGGCTCTCTCCGCGTGTTCCCAAAATTCTGAAGACCTAAACGAATGGAT
GGCACAAACGCGACGCGAAGCCAAAGCAGAAATCATACCTTTCCAAGCACCTACCCTGCCGGTTGCGCCGGTATACAGCC
CGCCGCAGCTTACAGGGCCGAACGCATTCGACTTCCGCCGCATGGAAACCGCCAAAAAAGGGGAAAATGCCCCCGACACC
AAGCGTATTAAAGAAACGCTGGAAAAATTCAGTTTGGAAAATATGCGTTATGTCGGCATTTTGAAGTCCGGACAGAAAGT
CTCCGGCTTCATCGAGGCTGAAGGTTATGTCTACACTGTCGGTGTCGGCAACTATTTGGGACAAAACTACGGTAGAATCG
AAAGCATTACCGACGACAGCATCATCCTGAACGAGCTGATAGAAGACAGCACGGGCAACTGGGTTTCCCGTAAAGCAGAA
CTGCTGTTGAATTCTTCCGACAAAAACACCGAACAAGCGGCAGCACCTGCCGCAGAACAAAATTAA
ATGAAACACTATGCCTTACTCATCAGCTTTCTGGCTCTCTCCGCGTGTTCCCAAAATTCTGAAGACCTAAACGAATGGAT
GGCACAAACGCGACGCGAAGCCAAAGCAGAAATCATACCTTTCCAAGCACCTACCCTGCCGGTTGCGCCGGTATACAGCC
CGCCGCAGCTTACAGGGCCGAACGCATTCGACTTCCGCCGCATGGAAACCGCCAAAAAAGGGGAAAATGCCCCCGACACC
AAGCGTATTAAAGAAACGCTGGAAAAATTCAGTTTGGAAAATATGCGTTATGTCGGCATTTTGAAGTCCGGACAGAAAGT
CTCCGGCTTCATCGAGGCTGAAGGTTATGTCTACACTGTCGGTGTCGGCAACTATTTGGGACAAAACTACGGTAGAATCG
AAAGCATTACCGACGACAGCATCATCCTGAACGAGCTGATAGAAGACAGCACGGGCAACTGGGTTTCCCGTAAAGCAGAA
CTGCTGTTGAATTCTTCCGACAAAAACACCGAACAAGCGGCAGCACCTGCCGCAGAACAAAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Neisseria meningitidis MC58 |
98.343 |
100 |
0.983 |