Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | VroAM7_RS14475 | Genome accession | NZ_AP019798 |
| Coordinates | 3077190..3077834 (+) | Length | 214 a.a. |
| NCBI ID | WP_143693009.1 | Uniprot ID | A0A510I8J7 |
| Organism | Vibrio rotiferianus strain AM7 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3072190..3082834
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VroAM7_RS14460 (VroAM7_27050) | - | 3072696..3074144 (-) | 1449 | WP_143693006.1 | PilN domain-containing protein | - |
| VroAM7_RS14465 (VroAM7_27060) | csrD | 3074147..3076162 (-) | 2016 | WP_143693007.1 | RNase E specificity factor CsrD | - |
| VroAM7_RS14470 (VroAM7_27070) | ssb | 3076379..3076912 (-) | 534 | WP_143693008.1 | single-stranded DNA-binding protein | Machinery gene |
| VroAM7_RS14475 (VroAM7_27080) | qstR | 3077190..3077834 (+) | 645 | WP_143693009.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| VroAM7_RS14480 (VroAM7_27090) | galU | 3077942..3078814 (+) | 873 | WP_077262150.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| VroAM7_RS14485 (VroAM7_27100) | uvrA | 3078952..3081774 (+) | 2823 | WP_138942200.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 24694.57 Da Isoelectric Point: 8.4568
>NTDB_id=74139 VroAM7_RS14475 WP_143693009.1 3077190..3077834(+) (qstR) [Vibrio rotiferianus strain AM7]
MRKSAYARKLFLISLKHDESSQLAQLKKYADMDIPLIGTDDLMEANPKHRNKILLIDFEEHKDLILSIKNLPLVWKNFET
IIFNVPKRLTTDELLSFGQLKGLFYKEDSAENIAEGFKEIINGQNWLPRNVTSQLLHYYRNVVSSHTTPATVDLTIRELQ
VLRCLQAGASNCQMAEELFVSEFTIKSHLYQIFKKLSVKNRVQAIAWADQNLLS
MRKSAYARKLFLISLKHDESSQLAQLKKYADMDIPLIGTDDLMEANPKHRNKILLIDFEEHKDLILSIKNLPLVWKNFET
IIFNVPKRLTTDELLSFGQLKGLFYKEDSAENIAEGFKEIINGQNWLPRNVTSQLLHYYRNVVSSHTTPATVDLTIRELQ
VLRCLQAGASNCQMAEELFVSEFTIKSHLYQIFKKLSVKNRVQAIAWADQNLLS
Nucleotide
Download Length: 645 bp
>NTDB_id=74139 VroAM7_RS14475 WP_143693009.1 3077190..3077834(+) (qstR) [Vibrio rotiferianus strain AM7]
ATGAGAAAATCTGCTTATGCGAGAAAACTCTTTCTTATCAGCTTAAAACACGATGAAAGCTCTCAGCTAGCACAACTGAA
GAAATATGCTGATATGGATATTCCTCTCATTGGAACTGATGACCTTATGGAAGCCAACCCTAAACATCGCAACAAGATCT
TACTCATTGACTTTGAAGAGCACAAAGACTTGATTCTATCGATTAAGAATCTTCCATTAGTATGGAAGAACTTTGAAACA
ATAATATTTAACGTCCCAAAACGCCTAACTACGGATGAGTTACTCTCATTTGGCCAGCTGAAAGGATTGTTCTATAAAGA
AGATAGTGCTGAAAATATCGCTGAGGGATTCAAAGAAATTATAAACGGCCAAAATTGGTTACCTAGGAATGTTACGAGCC
AACTCTTGCATTACTATCGTAATGTCGTCAGCTCTCATACCACTCCAGCAACCGTTGACCTCACCATTCGCGAGTTACAA
GTACTACGCTGTTTACAAGCAGGAGCTTCTAACTGCCAAATGGCAGAAGAACTATTTGTCAGTGAGTTCACAATAAAATC
ACACCTATATCAAATCTTCAAAAAACTATCCGTCAAAAATCGAGTCCAAGCGATAGCATGGGCAGATCAAAATCTTCTGT
CATGA
ATGAGAAAATCTGCTTATGCGAGAAAACTCTTTCTTATCAGCTTAAAACACGATGAAAGCTCTCAGCTAGCACAACTGAA
GAAATATGCTGATATGGATATTCCTCTCATTGGAACTGATGACCTTATGGAAGCCAACCCTAAACATCGCAACAAGATCT
TACTCATTGACTTTGAAGAGCACAAAGACTTGATTCTATCGATTAAGAATCTTCCATTAGTATGGAAGAACTTTGAAACA
ATAATATTTAACGTCCCAAAACGCCTAACTACGGATGAGTTACTCTCATTTGGCCAGCTGAAAGGATTGTTCTATAAAGA
AGATAGTGCTGAAAATATCGCTGAGGGATTCAAAGAAATTATAAACGGCCAAAATTGGTTACCTAGGAATGTTACGAGCC
AACTCTTGCATTACTATCGTAATGTCGTCAGCTCTCATACCACTCCAGCAACCGTTGACCTCACCATTCGCGAGTTACAA
GTACTACGCTGTTTACAAGCAGGAGCTTCTAACTGCCAAATGGCAGAAGAACTATTTGTCAGTGAGTTCACAATAAAATC
ACACCTATATCAAATCTTCAAAAAACTATCCGTCAAAAATCGAGTCCAAGCGATAGCATGGGCAGATCAAAATCTTCTGT
CATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio campbellii strain DS40M4 |
82.71 |
100 |
0.827 |
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
82.243 |
100 |
0.822 |
| qstR | Vibrio cholerae strain A1552 |
53.211 |
100 |
0.542 |