Detailed information NTG0740962

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: OIO72_RS04380
• Genome accession: NZ_CP107585
• Coordinates: 924660..925778 (-)
• Length: 372 a.a.
• NCBI ID: WP_000347036.1
• Uniprot ID: A0A009PAD6
• Organism: Acinetobacter baumannii strain 1326527-1
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 919660..930778

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OIO72_RS04350 (OIO72_04350)	-	920489..921337 (+)	849	WP_000336551.1	class II glutamine amidotransferase	-
OIO72_RS04355 (OIO72_04355)	-	921590..922045 (+)	456	WP_000782976.1	bacteriohemerythrin	-
OIO72_RS04360 (OIO72_04360)	-	922198..923265 (+)	1068	WP_031959810.1	membrane protein	-
OIO72_RS04365 (OIO72_04365)	-	923265..923588 (+)	324	WP_000442585.1	RnfH family protein	-
OIO72_RS04370 (OIO72_04370)	-	923643..924041 (-)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
OIO72_RS04375 (OIO72_04375)	fur	924153..924590 (+)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
OIO72_RS04380 (OIO72_04380)	pilU	924660..925778 (-)	1119	WP_000347036.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
OIO72_RS04385 (OIO72_04385)	pilT	925806..926843 (-)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
OIO72_RS04390 (OIO72_04390)	-	926970..927662 (+)	693	WP_031959811.1	YggS family pyridoxal phosphate-dependent enzyme	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41905.11 Da
• Isoelectric Point: 6.6944

>NTDB_id=740962 OIO72_RS04380 WP_000347036.1 924660..925778(-) (pilU) [Acinetobacter baumannii strain 1326527-1]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRKEFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=740962 OIO72_RS04380 WP_000347036.1 924660..925778(-) (pilU) [Acinetobacter baumannii strain 1326527-1]
ATGGATTTTAATGACCTGCTCAACCTGATGGTTGAAAAGAAATCATCGGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAATGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTATTACATTCCA
TCATGAGTGAAAAACAACGCAAAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTACAGTTACCACCTGTACTTAAAGATTTATCGATGACCAAACGTGGCATTATTATTTTCGTAGGCGCGACAG
GTACAGGTAAATCTACTTCATTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGTCACCTTGTATTAGCTACCATGCACGCCAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCACAGCCAGCTTTATATGGACTTGTCACTTAACTTAAAGGCTATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAGGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCTGATGAGGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

3D structure

• AlphaFold DB: A0A009PAD6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.293	98.925	0.685
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.197	93.011	0.392