Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   OIO75_RS00830 Genome accession   NZ_CP107583
Coordinates   177070..178200 (-) Length   376 a.a.
NCBI ID   WP_031959491.1    Uniprot ID   A0A836YN88
Organism   Acinetobacter baumannii strain 1326525-3     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 172070..183200
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OIO75_RS00805 (OIO75_00805) - 172242..173006 (-) 765 WP_000786959.1 AraC family transcriptional regulator -
  OIO75_RS00810 (OIO75_00810) - 173028..174242 (-) 1215 WP_000372838.1 MFS transporter -
  OIO75_RS00815 (OIO75_00815) - 174379..175032 (+) 654 WP_109067430.1 TetR/AcrR family transcriptional regulator -
  OIO75_RS00820 (OIO75_00820) - 175138..176058 (+) 921 WP_000084546.1 DMT family transporter -
  OIO75_RS00825 (OIO75_00825) - 176450..177019 (-) 570 WP_000633612.1 L-threonylcarbamoyladenylate synthase -
  OIO75_RS00830 (OIO75_00830) dprA 177070..178200 (-) 1131 WP_031959491.1 DNA-processing protein DprA Machinery gene
  OIO75_RS00835 (OIO75_00835) tsaP 178221..179375 (-) 1155 WP_000755282.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  OIO75_RS00840 (OIO75_00840) def 179498..180028 (+) 531 WP_001196539.1 peptide deformylase -
  OIO75_RS00845 (OIO75_00845) - 180065..180493 (+) 429 WP_000231981.1 DUF2946 family protein -
  OIO75_RS00850 (OIO75_00850) - 180566..182680 (+) 2115 WP_031959493.1 TonB-dependent copper receptor -
  OIO75_RS00855 (OIO75_00855) - 182734..182940 (+) 207 WP_000182542.1 hypothetical protein -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 41844.38 Da        Isoelectric Point: 6.4063

>NTDB_id=740907 OIO75_RS00830 WP_031959491.1 177070..178200(-) (dprA) [Acinetobacter baumannii strain 1326525-3]
MLTQLSSHQYHTLKVWYLVQHSLVSFKKIIDYFGNCEKATQPDGLAKWSSLGLHANHLKRVNEFQTPQGQAQFEQLVQQV
VQHTDFILTPDDSGYPTQLLPYTDYPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFFISSGLAYG
IDEAAHQGASAHQRTIAVTGTGLDTTYPAQNKKLAEHILAQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILIDHPEQIIEDLALPTQWQSQQQNQTEEANTNTPEIP
EHLIDLYQSLDWVGQNIDQLVIHHNVPVSELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=740907 OIO75_RS00830 WP_031959491.1 177070..178200(-) (dprA) [Acinetobacter baumannii strain 1326525-3]
ATGCTCACTCAACTTTCTTCACACCAATACCACACACTTAAAGTGTGGTATTTGGTGCAGCACTCTTTAGTCAGCTTTAA
AAAAATTATTGATTATTTTGGAAATTGTGAAAAAGCCACTCAACCTGATGGTTTAGCAAAGTGGTCCTCTCTGGGGCTAC
ATGCTAATCACTTAAAGCGTGTAAACGAATTTCAAACGCCCCAAGGTCAAGCGCAGTTTGAACAACTTGTACAACAAGTT
GTTCAACATACGGATTTTATTTTAACGCCGGATGACTCTGGCTATCCCACTCAATTACTTCCTTATACAGATTATCCACC
TATTATTTTTGGGAAAGGTCAAGCGCAAGCTTTATTGCAACCTCAGATTGCGATTGTCGGTAGCCGAAAACCAAGCCCAC
ATGGACGACAGGTCGCTTATGATTTTGCTTATTACTTAAGTGAAAAGGGCTTTTTCATTAGTAGTGGTCTGGCTTATGGC
ATTGATGAAGCCGCTCATCAAGGTGCATCTGCTCATCAACGTACCATTGCAGTGACGGGTACGGGCTTAGACACTACTTA
TCCAGCTCAAAATAAAAAACTTGCAGAACATATTTTAGCTCAAAACGGCGCCATTATTACTGAGTTTTTACCGGGTACAC
CACCATTACAACAGCATTTCCCACGTAGAAACCGAATTGTCAGCGGTTTGAGTTTAGGCGTTTTGGTGGTAGAAGCGACA
TTAAAAAGCGGCTCACTCATCACGGCCAATAAAGCCGCTGAACAAGGTAAAACCGTATTCGCGATTCCGGGTCATATTTA
TAGCGAGTTTCATCAAGGATGCCATCAACTTATCCGTGAAGGTGCAATTTTAATCGACCATCCTGAACAGATTATTGAGG
ATCTTGCTTTACCAACCCAATGGCAAAGTCAGCAACAAAATCAAACTGAAGAAGCTAATACGAATACTCCAGAAATTCCT
GAGCATTTGATTGACCTTTATCAGTCTTTAGACTGGGTGGGACAAAATATTGACCAGCTTGTAATTCATCATAATGTGCC
GGTTTCTGAACTGACCTCTTCACTAATGGAACTAGAACTACTCGGTTTATGTATGCAACAATCAGGGCTGTATTTACGTT
GTCGTTCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A836YN88

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

98.138

100

0.981

  dprA Acinetobacter baumannii D1279779

97.872

100

0.979

  dprA Acinetobacter baylyi ADP1

70.341

100

0.713

  dprA Vibrio cholerae strain A1552

42.9

88.032

0.378