Detailed information NTG0738866

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: QBL25_RS15955
• Genome accession: NZ_CP122310
• Coordinates: 3629314..3630600 (-)
• Length: 428 a.a.
• NCBI ID: WP_409057699.1
• Uniprot ID: -
• Organism: Streptomyces sp. SYP-A7185
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3624314..3635600

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QBL25_RS15940	-	3624381..3627005 (-)	2625	WP_409057696.1	valine--tRNA ligase	-
QBL25_RS15945	-	3627142..3628077 (+)	936	WP_409057697.1	hypothetical protein	-
QBL25_RS15950	-	3628185..3629192 (+)	1008	WP_409057698.1	hypothetical protein	-
QBL25_RS15955	clpX	3629314..3630600 (-)	1287	WP_409057699.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
QBL25_RS15960	clpP	3630757..3631437 (-)	681	WP_409057700.1	ATP-dependent Clp protease proteolytic subunit	Regulator
QBL25_RS15965	clpP	3631500..3632105 (-)	606	WP_190080566.1	ATP-dependent Clp protease proteolytic subunit	Regulator
QBL25_RS15970	tig	3632408..3633805 (-)	1398	WP_409057701.1	trigger factor	-
QBL25_RS15985	-	3634399..3634593 (-)	195	WP_160505028.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46867.67 Da
• Isoelectric Point: 4.7828

>NTDB_id=738866 QBL25_RS15955 WP_409057699.1 3629314..3630600(-) (clpX) [Streptomyces sp. SYP-A7185]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGETGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIHSKRELQEKDRFEDIMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVHSNVNPTLVPREVRGPGPGEQKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=738866 QBL25_RS15955 WP_409057699.1 3629314..3630600(-) (clpX) [Streptomyces sp. SYP-A7185]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGGAAGAGTCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGTCCCGGTGTGTACATCTGCGATGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCTCGCGAGATCTACGAATTCCTCGAGGGCTACGTCGTGGGCCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTGGCGGTCTACAACCACTACAAGCGGGTGCAGGCCGGGGAGACCGGCGGCGCACAGGGCCG
TGACGACGCGATCGAACTCGCCAAGTCCAACATCCTGCTGCTCGGCCCGACCGGTTCCGGCAAGACGCTGCTCGCGCAGA
CGCTCGCGCGCATGCTGAACGTCCCGTTCGCCATCGCGGACGCGACGGCGCTCACGGAGGCGGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTCCTGAAGCTCATCCAGGCCGCTGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCTTCGATCACCCGCGATGTCTCGGGAGAAGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAAGGCACGACGGCTTCCGTTCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCCTTCGCCGGCCTCGAGAAGATCATCGAGTCGCGGGCGGGCGC
CAAGGGCATCGGCTTCGGCGCCACGATCCACTCCAAGCGCGAACTCCAGGAGAAGGACCGGTTCGAGGACATCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGCCTCCCCGTGATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTGGTGGAGCCGCGCAACGCACTCGTGAAGCAGTACCAGCGCCTGTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACG
GCGGACGTCGTCCACTCGAACGTGAACCCGACCCTGGTGCCGCGCGAGGTGCGGGGCCCGGGCCCGGGCGAGCAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.935	93.925	0.591
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.479	96.495	0.526