Detailed information NTG0738296

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: MTS71_RS13705
• Genome accession: NZ_CP121612
• Coordinates: 2861983..2863101 (-)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain JAB117
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2856983..2868101

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MTS71_RS13675 (MTS71_13675)	-	2857812..2858660 (+)	849	WP_000336548.1	class II glutamine amidotransferase	-
MTS71_RS13680 (MTS71_13680)	-	2858913..2859368 (+)	456	WP_000782976.1	bacteriohemerythrin	-
MTS71_RS13685 (MTS71_13685)	-	2859521..2860588 (+)	1068	WP_002019572.1	hypothetical protein	-
MTS71_RS13690 (MTS71_13690)	-	2860588..2860911 (+)	324	WP_000442587.1	RnfH family protein	-
MTS71_RS13695 (MTS71_13695)	bamE	2860966..2861364 (-)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
MTS71_RS13700 (MTS71_13700)	fur	2861476..2861913 (+)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
MTS71_RS13705 (MTS71_13705)	pilU	2861983..2863101 (-)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
MTS71_RS13710 (MTS71_13710)	pilT	2863129..2864166 (-)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
MTS71_RS13715 (MTS71_13715)	-	2864293..2864985 (+)	693	WP_001108512.1	YggS family pyridoxal phosphate-dependent enzyme	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=738296 MTS71_RS13705 WP_000347039.1 2861983..2863101(-) (pilU) [Acinetobacter baumannii strain JAB117]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=738296 MTS71_RS13705 WP_000347039.1 2861983..2863101(-) (pilU) [Acinetobacter baumannii strain JAB117]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCACTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395