Detailed information NTG0737237

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: P9J63_RS13705
• Genome accession: NZ_CP121375
• Coordinates: 2783508..2784512 (+)
• Length: 334 a.a.
• NCBI ID: WP_001154002.1
• Uniprot ID: A3M7W1
• Organism: Acinetobacter baumannii strain LRT
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2778508..2789512

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P9J63_RS13695 (P9J63_13695)	-	2781468..2782808 (+)	1341	WP_000437078.1	deoxyguanosinetriphosphate triphosphohydrolase	-
P9J63_RS13700 (P9J63_13700)	ruvA	2782900..2783499 (+)	600	WP_000578663.1	Holliday junction branch migration protein RuvA	-
P9J63_RS13705 (P9J63_13705)	ruvB	2783508..2784512 (+)	1005	WP_001154002.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
P9J63_RS13710 (P9J63_13710)	-	2784717..2786051 (+)	1335	WP_032036570.1	M20 family metallopeptidase	-
P9J63_RS13715 (P9J63_13715)	ybgC	2786262..2786669 (+)	408	WP_001273591.1	tol-pal system-associated acyl-CoA thioesterase	-
P9J63_RS13720 (P9J63_13720)	tolQ	2786693..2787391 (+)	699	WP_005138206.1	protein TolQ	-
P9J63_RS13725 (P9J63_13725)	tolR	2787391..2787843 (+)	453	WP_001007562.1	protein TolR	-
P9J63_RS13730 (P9J63_13730)	tolA	2787847..2789250 (+)	1404	WP_109123066.1	cell envelope integrity protein TolA	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36815.05 Da
• Isoelectric Point: 4.7936

>NTDB_id=737237 P9J63_RS13705 WP_001154002.1 2783508..2784512(+) (ruvB) [Acinetobacter baumannii strain LRT]
MQDRLISGTEKPEDHFDRAIRPTSLADYIGQPVVREQMEIFIGAARGRGEALDHTLIFGPPGLGKTTLANIIAREMGGNL
KSTSGPVLERAGDLAAMLTNLEEGDVLFIDEIHRLSPVIEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVAATTR
AGLLTSPLRDRFGIVQRLEFYSVEDLTHIVSRSANLMDVPITVEGAEEVARRSRGTPRIANRLLRRVRDYAQVKGTGEVN
HEMAQRALDMLNVDKAGLDTLDRRYLSMLLERFDGGPAGVEALAAAMAEDSGTLEDVIEPYLIQQGYVMRTARGRIATNQ
SYLQFGMTPPEPKN

Nucleotide

• Length: 1005 bp

>NTDB_id=737237 P9J63_RS13705 WP_001154002.1 2783508..2784512(+) (ruvB) [Acinetobacter baumannii strain LRT]
ATGCAAGACCGTCTAATCAGTGGAACAGAAAAACCTGAAGATCATTTTGATCGGGCTATTCGACCGACTTCACTTGCCGA
TTATATCGGGCAACCAGTCGTACGCGAGCAAATGGAAATTTTCATCGGTGCGGCTCGTGGTCGTGGTGAAGCACTCGATC
ACACACTGATTTTCGGTCCACCAGGCTTAGGAAAAACCACGCTTGCCAATATTATTGCGCGTGAAATGGGTGGCAATCTC
AAATCCACTTCAGGGCCTGTTTTAGAGCGTGCGGGTGATTTGGCTGCAATGCTAACTAACCTTGAAGAAGGCGATGTTTT
ATTTATTGATGAAATTCACCGTCTTTCACCAGTAATTGAAGAAATTCTGTATCCAGCAATGGAAGATTACCAACTCGATA
TCATGATTGGTGAAGGCCCTGCTGCTCGTTCAATTAAACTCGATTTACCACCTTTTACGCTCGTTGCTGCGACCACACGT
GCCGGCTTACTCACCTCGCCCCTACGTGACCGTTTCGGTATTGTGCAACGTCTTGAATTCTATTCTGTAGAAGACCTAAC
TCACATCGTGTCACGATCTGCAAACCTCATGGATGTACCCATTACAGTTGAGGGTGCAGAAGAAGTTGCACGCCGTTCAC
GCGGAACACCGCGTATTGCCAATCGTTTATTACGCCGTGTACGTGACTATGCACAAGTAAAAGGTACAGGCGAAGTTAAC
CATGAAATGGCACAACGTGCGCTTGATATGCTTAATGTCGATAAAGCTGGTTTAGACACCTTAGACCGACGTTATTTAAG
TATGCTGTTAGAACGTTTTGATGGTGGACCTGCTGGTGTTGAAGCCCTTGCAGCTGCTATGGCTGAAGATAGCGGAACAC
TTGAAGATGTTATTGAACCTTATTTAATTCAGCAAGGTTATGTTATGCGTACTGCACGAGGTCGCATTGCAACCAACCAA
TCTTATTTGCAGTTTGGCATGACGCCACCTGAGCCTAAAAACTAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-322)

• RuvB AAA lid domain (AAA_lid_4) (181-254)

3D structure

• AlphaFold DB: A3M7W1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Bacillus subtilis subsp. subtilis str. 168	57.704	99.102	0.572
ruvB	Synechocystis sp. PCC 6803	57.325	94.012	0.539
ruvB	Streptococcus pneumoniae TIGR4	56.113	95.509	0.536
ruvB	Streptococcus pneumoniae R6	56.113	95.509	0.536
ruvB	Streptococcus pneumoniae D39	56.113	95.509	0.536
ruvB	Helicobacter pylori 26695	54.934	91.018	0.5