Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   OCL40_RS00605 Genome accession   NZ_CP106803
Coordinates   128147..130189 (+) Length   680 a.a.
NCBI ID   WP_080282912.1    Uniprot ID   -
Organism   Neisseria gonorrhoeae strain 10819     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 123147..135189
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OCL40_RS00580 (OCL40_00580) - 123633..124260 (+) 628 Protein_109 response regulator transcription factor -
  OCL40_RS00585 (OCL40_00585) - 124342..125593 (+) 1252 Protein_110 ATP-binding protein -
  OCL40_RS00590 (OCL40_00590) rng 125628..127121 (-) 1494 WP_003687377.1 ribonuclease G -
  OCL40_RS00595 (OCL40_00595) grxC 127340..127597 (+) 258 WP_003687379.1 glutaredoxin 3 -
  OCL40_RS00600 (OCL40_00600) secB 127618..128061 (+) 444 WP_003694765.1 protein-export chaperone SecB -
  OCL40_RS00605 (OCL40_00605) recG 128147..130189 (+) 2043 WP_080282912.1 ATP-dependent DNA helicase RecG Machinery gene
  OCL40_RS00610 (OCL40_00610) argC 130783..131826 (-) 1044 WP_003702278.1 N-acetyl-gamma-glutamyl-phosphate reductase -
  OCL40_RS00615 (OCL40_00615) - 131823..132116 (-) 294 WP_002258326.1 hypothetical protein -
  OCL40_RS00620 (OCL40_00620) - 132368..133522 (+) 1155 WP_012503367.1 cupin domain-containing protein -
  OCL40_RS00625 (OCL40_00625) - 133531..133758 (+) 228 WP_260236856.1 hypothetical protein -
  OCL40_RS00630 (OCL40_00630) - 133751..134104 (+) 354 WP_003704890.1 hypothetical protein -

Sequence

Protein


Download         Length: 680 a.a.        Molecular weight: 74863.89 Da        Isoelectric Point: 7.6786

>NTDB_id=735362 OCL40_RS00605 WP_080282912.1 128147..130189(+) (recG) [Neisseria gonorrhoeae strain 10819]
MMSPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETHIMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQI
ADGSGSVLFLRFIHFYASHQKQTAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
QTALDVTPLHDTLPDALLCRLKLPHLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRVSGTA
AALRGDGTLTQALRQALPFALTDAQEKVVSEICRDMAQTHPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEI
LAEQHFIKFKQWLEPLGIEVVCLFGSLRKKAKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLSIVDEQHRFGVAQRL
ALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRLVNNVRRAEVEGFVLGTCRKGRQAYWVCPLI
EESETLQLQTAAETLARLQTALPEPNIGLVHGRMKAAEKAEVMAEFAAGRLNVLVATTVIEVGVDVPNAALMVIEHAERM
GLAQLHQLRGRVGRGAGESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFAKLEE
DLHLLEQARETAPMLIEQNPEIVEAHLARWLSGREGYLGV

Nucleotide


Download         Length: 2043 bp        

>NTDB_id=735362 OCL40_RS00605 WP_080282912.1 128147..130189(+) (recG) [Neisseria gonorrhoeae strain 10819]
ATGATGTCGCCCGAAACCCAGAAACAGCTCAAAATCACCGATGTTTCCGCCAAGAAGCTCGACAAACTCAACCTCCATAC
CGCGTGGGATTTGGTGTTGCACCTGCCGCTGCGTTACGAGGACGAGACGCACATTATGCCGATTAAGGACGCGCCGATTG
GCGTGCCGTGTCAGGTCGAGGGCGAGGTTATCCATCAGGAAGTAACGTTCAAACCGCGCAAGCAGCTGATTGTCCAAATT
GCCGACGGTTCCGGCAGCGTCCTTTTTCTGCGCTTCATCCACTTTTACGCCAGCCATCAGAAGCAGACGGCGGTCGGCAA
ACGCATCCGCGCCGTGGGCGAAATCAAACACGGATTTTACGGCGACGAGATGATTCATCCCAAAATCCGCGATGCCGAGG
GCGGCGGTTTGGCGGAAAGCCTCACGCCGGTTTACCCGACCGTAAACGGTTTGAACCAGCCCACTTTGCGCCGCATCATT
CAGACGGCGTTGGACGTTACGCCGCTGCACGACACGCTGCCCGATGCCCTGCTGTGCCGTCTGAAGCTGCCGCACCTTGC
CGAAAGCCTGCGCCTTTTGCATTCGCCGCCGCCGAGTTTCACTATTCATCAACTTTCAGACGGCACGCTGCCGGCGTGGC
AGCGGCTCAAATTCGACGAACTTTTGGCGCAACAGTTGTCCATGCGTTTGGCGCGGCAGAAGCGCGTCAGCGGCACGGCG
GCGGCATTGCGCGGCGACGGCACATTGACCCAAGCCCTGCGCCAAGCCCTGCCGTTTGCCCTGACCGATGCACAAGAAAA
AGTTGTTTCCGAAATCTGCCGCGATATGGCGCAAACCCACCCCATGCACCGCCTGCTGCAAGGCGATGTCGGCAGCGGCA
AAACCATCGTCGCCGCCTTATCCGCGCTGACCGCCATCGAATCAGGCGCGCAAGTGGCTGTAATGGCGCCCACTGAAATC
CTTGCCGAACAGCACTTCATCAAGTTCAAACAATGGCTCGAACCTTTGGGCATTGAAGTTGTCTGCCTTTTTGGCAGTTT
GCGCAAAAAAGCCAAAGACGAAGCCAAAGCCAAACTCGCCGACGGCAGCGTCAAAATCGCCGTCGGCACGCACGCCCTGT
TTTCAGACGGCGTGGCGTTTCACAATTTGGGCTTGAGCATTGTGGACGAACAGCACCGTTTCGGCGTTGCACAACGCCTC
GCACTCAAAAACAAAGGGCGCGAAGTCCATCAGCTGATGATGTCCGCCACACCCATCCCGCGCACGCTCGCCATGAGTTT
CTTCGCTGACTTGGACGTATCCGTCATCGACGAATTGCCGCCCGGGCGCACTCCGATTAAAACGCGCCTCGTCAACAACG
TCCGCCGCGCCGAAGTCGAAGGCTTCGTCCTCGGCACTTGCCGAAAAGGGCGGCAGGCATATTGGGTCTGCCCATTGATT
GAAGAAAGCGAAACCCTGCAACTGCAAACCGCCGCCGAAACCCTCGCCCGGCTTCAGACGGCATTGCCCGAACCCAATAT
CGGACTGGTACACGGGCGCATGAAGGCCGCCGAAAAAGCCGAAGTCATGGCGGAATTTGCCGCAGGCCGTCTGAACGTCT
TGGTCGCCACCACCGTTATCGAAGTCGGCGTAGATGTGCCCAATGCCGCCCTGATGGTCATCGAACACGCCGAGCGCATG
GGCTTGGCGCAGCTTCACCAATTACGCGGACGGGTAGGGCGCGGCGCGGGGGAAAGCGTGTGCGTCCTCCTGTTTGCCGA
ACCCTTGGGCGAACTCGCCAAAGCGCGGCTGAAAGTCATCTACGAACACACCGACGGCTTTGAAATCGCCCGCCAAGACC
TCAACATCCGCGGCCCCGGCGAATTTCTCGGCGCGCGCCAAAGCGGCGTGCCTATGCTGCGCTTCGCCAAGCTCGAAGAA
GACTTACACCTTTTGGAACAAGCGCGCGAAACCGCCCCGATGCTGATTGAACAAAACCCTGAAATCGTCGAAGCGCATTT
GGCAAGGTGGCTTTCCGGCAGGGAAGGTTATTTGGGTGTGTGA

Domains

Predicted by InterproScan.

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(604-666)

Helicase conserved C-terminal domain (Helicase_C)

(469-575)

DEAD/DEAH box helicase (DEAD)

(262-421)

RecG wedge domain (RecG_wedge)

(15-164)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

98.088

100

0.981