Detailed information NTG0073461

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: FNP71_RS19320
• Genome accession: NZ_AP019714
• Coordinates: 3636427..3637149 (-)
• Length: 240 a.a.
• NCBI ID: WP_003227991.1
• Uniprot ID: A0AAE2SKX0
• Organism: Bacillus subtilis subsp. subtilis strain NBRC 13719
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3631427..3642149

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FNP71_RS19285 (NBRC13719_36470)	fliW	3631566..3631997 (-)	432	WP_003228007.1	flagellar assembly protein FliW	-
FNP71_RS19290 (NBRC13719_36480)	yviE	3632018..3632593 (-)	576	WP_003243053.1	DUF6470 family protein	-
FNP71_RS19295 (NBRC13719_36490)	flgL	3632640..3633536 (-)	897	WP_003228004.1	flagellar hook-associated protein FlgL	-
FNP71_RS19300 (NBRC13719_36500)	flgK	3633547..3635070 (-)	1524	WP_003228001.1	flagellar hook-associated protein FlgK	-
FNP71_RS19305 (NBRC13719_36510)	flgN	3635089..3635571 (-)	483	WP_003227999.1	flagellar protein FlgN	-
FNP71_RS19310 (NBRC13719_36520)	flgM	3635587..3635853 (-)	267	WP_003227997.1	flagellar biosynthesis anti-sigma factor FlgM	-
FNP71_RS19315 (NBRC13719_36530)	yvyF	3635934..3636353 (-)	420	WP_003227995.1	TIGR03826 family flagellar region protein	-
FNP71_RS19320 (NBRC13719_36540)	comFC	3636427..3637149 (-)	723	WP_003227991.1	comF operon protein ComFC	Machinery gene
FNP71_RS19325 (NBRC13719_36550)	comFB	3637113..3637409 (-)	297	WP_003227989.1	late competence protein ComFB	-
FNP71_RS19330 (NBRC13719_36560)	comFA	3637469..3638860 (-)	1392	WP_003243962.1	ATP-dependent helicase ComFA	Machinery gene
FNP71_RS19335 (NBRC13719_36570)	fakBA	3638966..3639811 (-)	846	WP_003244125.1	DegV family protein	-
FNP71_RS19340 (NBRC13719_36580)	degU	3639909..3640598 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
FNP71_RS19345 (NBRC13719_36590)	degS	3640681..3641838 (-)	1158	WP_003227983.1	two-component sensor histidine kinase DegS	Regulator

Sequence

Protein

• Length: 240 a.a.
• Molecular weight: 27477.75 Da
• Isoelectric Point: 9.0021

>NTDB_id=73461 FNP71_RS19320 WP_003227991.1 3636427..3637149(-) (comFC) [Bacillus subtilis subsp. subtilis strain NBRC 13719]
MSNEAGGGIHKLICLLCDSQFSQDVTWRALFLLKPDEKVCYSCRSKLKKITGHICPLCGRPQSVHAVCRDCEVWRTRIRD
SLLLRQNRSVYTYNDMMKETLSRFKFRGDAEIINAFKSDFSSTFSKVYPDKHFVLVPIPLSKEREEERGFNQAHLLAECL
DRPSHHPLIRLNNEKQSKKKKTERLLSECIFDTKNNSAEGMNIILIDDLYTTGATLHFAARCLLEKGKAASVSSFTLIRS

Nucleotide

• Length: 723 bp

>NTDB_id=73461 FNP71_RS19320 WP_003227991.1 3636427..3637149(-) (comFC) [Bacillus subtilis subsp. subtilis strain NBRC 13719]
ATGTCAAACGAAGCAGGAGGAGGCATTCATAAACTGATCTGTTTATTATGTGATTCGCAATTTTCTCAAGATGTTACATG
GAGAGCCCTTTTTTTACTAAAGCCTGATGAAAAGGTTTGTTATTCTTGCAGAAGCAAATTAAAGAAAATCACAGGACATA
TCTGCCCCCTGTGCGGCAGACCTCAATCTGTTCATGCCGTATGCAGGGATTGCGAGGTGTGGAGAACAAGGATCAGAGAC
AGTTTGCTATTGCGTCAAAACCGTTCAGTTTACACATATAATGATATGATGAAAGAAACGCTCTCCCGTTTTAAATTTAG
AGGAGATGCAGAAATCATAAATGCATTTAAAAGTGATTTTTCTTCAACCTTTTCTAAGGTTTACCCCGATAAGCATTTTG
TTCTTGTACCTATTCCGCTGAGCAAGGAACGGGAAGAAGAGCGCGGATTTAACCAGGCACATCTCTTGGCAGAATGTTTA
GACCGGCCTTCCCACCATCCCCTCATTCGCCTGAATAATGAGAAACAGTCAAAGAAAAAGAAAACAGAACGCCTGCTGTC
AGAGTGCATTTTTGATACAAAAAATAATTCAGCAGAAGGTATGAATATCATTTTAATAGACGATCTTTATACAACAGGCG
CCACCTTGCACTTCGCAGCCCGCTGCTTATTAGAAAAAGGAAAAGCCGCTTCAGTGTCATCTTTTACCTTGATCAGAAGC
TAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (14-71)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	100	100	1