Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   OEG80_RS02060 Genome accession   NZ_CP106752
Coordinates   486405..486782 (+) Length   125 a.a.
NCBI ID   WP_011514416.1    Uniprot ID   A0A1U6GPZ7
Organism   Psychrobacter sp. SC65A.3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 481405..491782
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OEG80_RS02050 (SC65A3_00418) - 483496..484218 (-) 723 WP_011514418.1 response regulator transcription factor -
  OEG80_RS02055 (SC65A3_00419) - 484501..485745 (-) 1245 WP_263241508.1 efflux RND transporter periplasmic adaptor subunit -
  OEG80_RS02060 (SC65A3_00420) pilG 486405..486782 (+) 378 WP_011514416.1 twitching motility response regulator PilG Regulator
  OEG80_RS02065 (SC65A3_00421) - 486948..487310 (+) 363 WP_011514415.1 response regulator -
  OEG80_RS02070 (SC65A3_00422) - 487314..487844 (+) 531 WP_020444252.1 chemotaxis protein CheW -
  OEG80_RS02075 (SC65A3_00423) - 488071..489375 (+) 1305 Protein_390 methyl-accepting chemotaxis protein -
  OEG80_RS02080 (SC65A3_00424) - 489565..490533 (+) 969 WP_263241510.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 125 a.a.        Molecular weight: 14050.14 Da        Isoelectric Point: 4.7289

>NTDB_id=734445 OEG80_RS02060 WP_011514416.1 486405..486782(+) (pilG) [Psychrobacter sp. SC65A.3]
MENNFDGLKVMVIDDSKTIRRTAETLLQKAGCEVVTAIDGFDALAKIVDHNPDIIFVDIMMPRLDGYQTCALIKNNPDYA
SKPVIMLSSKDGLFDKARGRIVGSDEYLTKPFSKDELFEAINQYR

Nucleotide


Download         Length: 378 bp        

>NTDB_id=734445 OEG80_RS02060 WP_011514416.1 486405..486782(+) (pilG) [Psychrobacter sp. SC65A.3]
ATGGAAAATAATTTTGATGGTTTAAAAGTAATGGTTATTGATGACTCAAAAACCATTCGCCGTACCGCAGAAACCTTGCT
GCAAAAAGCGGGCTGTGAAGTTGTCACTGCCATTGATGGATTTGATGCCTTGGCTAAGATTGTCGACCACAATCCAGATA
TTATTTTTGTGGATATCATGATGCCACGTTTGGACGGTTATCAAACTTGTGCCTTGATTAAAAATAACCCTGACTATGCC
AGTAAACCTGTGATTATGTTGTCATCTAAAGATGGTTTATTTGATAAAGCCCGTGGACGTATTGTAGGTTCTGATGAATA
TCTGACCAAACCGTTTAGTAAGGATGAGCTTTTTGAGGCAATTAACCAGTATCGTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1U6GPZ7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.419

99.2

0.768
  vicR Streptococcus mutans UA159

40.517

92.8

0.376
  micA Streptococcus pneumoniae Cp1015

42.202

87.2

0.368
  pilH Synechocystis sp. PCC 6803

40.351

91.2

0.368