Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   P4B20_RS02135 Genome accession   NZ_CP120706
Coordinates   459596..459991 (+) Length   131 a.a.
NCBI ID   WP_309265103.1    Uniprot ID   -
Organism   Pseudomonas aeruginosa strain NY11104     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 454596..464991
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P4B20_RS02105 (P4B20_02105) - 454644..455648 (-) 1005 WP_017148568.1 aspartate carbamoyltransferase catalytic subunit -
  P4B20_RS02110 (P4B20_02110) pyrR 455672..456184 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  P4B20_RS02115 (P4B20_02115) ruvX 456296..456730 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  P4B20_RS02120 (P4B20_02120) - 456730..457299 (-) 570 WP_003100947.1 YqgE/AlgH family protein -
  P4B20_RS02125 (P4B20_02125) - 457348..458241 (-) 894 WP_003162015.1 energy transducer TonB -
  P4B20_RS02130 (P4B20_02130) gshB 458388..459341 (-) 954 WP_003100943.1 glutathione synthase -
  P4B20_RS02135 (P4B20_02135) pilG 459596..459991 (+) 396 WP_309265103.1 twitching motility response regulator PilG Regulator
  P4B20_RS02140 (P4B20_02140) pilH 460038..460403 (+) 366 WP_003084587.1 twitching motility response regulator PilH Machinery gene
  P4B20_RS02145 (P4B20_02145) - 460454..460990 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  P4B20_RS02150 (P4B20_02150) pilJ 461075..463123 (+) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  P4B20_RS02155 (P4B20_02155) pilK 463184..464059 (+) 876 WP_003084594.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14260.63 Da        Isoelectric Point: 7.1333

>NTDB_id=734157 P4B20_RS02135 WP_309265103.1 459596..459991(+) (pilG) [Pseudomonas aeruginosa strain NY11104]
MEQQSDGLKVMVIDDSKTIRTLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFKSTPV
IMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 396 bp        

>NTDB_id=734157 P4B20_RS02135 WP_309265103.1 459596..459991(+) (pilG) [Pseudomonas aeruginosa strain NY11104]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGAACACTGCTGAAAAAGGTCGG
TTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACATCATTTTCGTCG
ACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAGTCCACCCCGGTG
ATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTACCTCACCAAGCC
GTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCGTTTCCTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

71.654

96.947

0.695
  vicR Streptococcus mutans UA159

44.444

89.313

0.397
  micA Streptococcus pneumoniae Cp1015

39.024

93.893

0.366