Detailed information NTG0733743

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: N7921_RS17250
• Genome accession: NZ_CP106652
• Coordinates: 3300534..3301709 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus safensis strain 33.4
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3295534..3306709

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N7921_RS17220 (N7921_17220)	-	3295703..3296122 (-)	420	WP_039181808.1	TIGR03826 family flagellar region protein	-
N7921_RS17225 (N7921_17225)	comFC	3296179..3296865 (-)	687	WP_263639812.1	ComF family protein	Machinery gene
N7921_RS17230 (N7921_17230)	-	3296862..3297155 (-)	294	WP_041088040.1	late competence development ComFB family protein	-
N7921_RS17235 (N7921_17235)	comFA	3297205..3298602 (-)	1398	WP_276553807.1	DEAD/DEAH box helicase	Machinery gene
N7921_RS17240 (N7921_17240)	-	3298722..3299564 (-)	843	WP_263639814.1	DegV family protein	-
N7921_RS17245 (N7921_17245)	degU	3299780..3300469 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
N7921_RS17250 (N7921_17250)	degS	3300534..3301709 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
N7921_RS17255 (N7921_17255)	-	3301929..3302597 (+)	669	WP_263639815.1	YigZ family protein	-
N7921_RS17260 (N7921_17260)	-	3302582..3303673 (+)	1092	WP_095409678.1	LCP family protein	-
N7921_RS17265 (N7921_17265)	-	3303709..3304776 (-)	1068	WP_048237563.1	glycosyltransferase family 4 protein	-
N7921_RS17270 (N7921_17270)	tuaH	3304911..3306107 (-)	1197	WP_263640239.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=733743 N7921_RS17250 WP_003213166.1 3300534..3301709(-) (degS) [Bacillus safensis strain 33.4]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=733743 N7921_RS17250 WP_003213166.1 3300534..3301709(-) (degS) [Bacillus safensis strain 33.4]
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGAATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATCAAGCAGCAAG
TAAACGAAGTAATTGATTTTGGGGACAAGCTGGAAGTCCATACAAGACATGCTAGAAATCGCTTATCTGAGGTTAGCAGA
AACTTCAACAAATTTAGCGAAGAAGAAATCCGTGAGGCCTACGAAAAAGCACATAACTTGCAAGTGGAACTCACCATGAT
CCAGCAGCGTGAGAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGACGATTATTAAGCTTACAAGACGTCATTGAAC
GTTCTGAAACGCTTGTGAGTCAGATTACAGTGGTTCTCAACTATCTCAATCAGGATTTACGCCAGGTCGGCGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGTCTCAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGAGTGTCTCGGGA
AATTCATGACGGCCCTGCTCAAATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGAATTTTTAGAGACCGCG
GTACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTGATTCCGACACTGAGAAAATACTTAAACACAATTGAAGAATA
TGATGGGAAAACCAAAATTACCTTCCAATGCCTAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTAAAGCATTCTGAAGCTGAAGAAATCTCTGTCAAAGTAGAAGTA
ACGAAAGACTTTGTGACCTTAATTATTAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGAAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGAGTGCCATTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841