Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | SAP2_RS12380 | Genome accession | NZ_AP019698 |
| Coordinates | 2568666..2569187 (-) | Length | 173 a.a. |
| NCBI ID | WP_002509650.1 | Uniprot ID | A0A7V7VFU9 |
| Organism | Staphylococcus arlettae strain P2 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2563666..2574187
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAP2_RS12380 (SAP2_24640) | ssbA | 2568666..2569187 (-) | 522 | WP_002509650.1 | single-stranded DNA-binding protein | Machinery gene |
| SAP2_RS12385 (SAP2_24650) | rpsF | 2569202..2569507 (-) | 306 | WP_002509651.1 | 30S ribosomal protein S6 | - |
| SAP2_RS12390 (SAP2_24660) | - | 2569840..2570625 (+) | 786 | WP_142020030.1 | GH25 family lysozyme | - |
| SAP2_RS12395 (SAP2_24670) | ychF | 2570745..2571842 (-) | 1098 | WP_142020032.1 | redox-regulated ATPase YchF | - |
| SAP2_RS12400 (SAP2_24680) | - | 2571842..2572057 (-) | 216 | WP_142020034.1 | DUF951 domain-containing protein | - |
| SAP2_RS12405 (SAP2_24690) | - | 2572076..2572963 (-) | 888 | WP_002509655.1 | mechanosensitive ion channel family protein | - |
| SAP2_RS13140 (SAP2_24700) | - | 2573217..2573750 (+) | 534 | WP_331991097.1 | sialate O-acetylesterase | - |
| SAP2_RS13145 (SAP2_24710) | - | 2573698..2574069 (+) | 372 | WP_331991099.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 173 a.a. Molecular weight: 19108.61 Da Isoelectric Point: 4.9056
>NTDB_id=73328 SAP2_RS12380 WP_002509650.1 2568666..2569187(-) (ssbA) [Staphylococcus arlettae strain P2]
MINRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRKQAENVNNYLSKGSLAGVDGRIQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNQNQRHNQSSGNNFQDYGQGFGGQQAGQNTSSYQNNNNNNSSNSGQSDNPFANA
NGPIDISDDDLPF
MINRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRKQAENVNNYLSKGSLAGVDGRIQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNQNQRHNQSSGNNFQDYGQGFGGQQAGQNTSSYQNNNNNNSSNSGQSDNPFANA
NGPIDISDDDLPF
Nucleotide
Download Length: 522 bp
>NTDB_id=73328 SAP2_RS12380 WP_002509650.1 2568666..2569187(-) (ssbA) [Staphylococcus arlettae strain P2]
ATGATAAACAGAGTTGTTTTAGTAGGTCGTTTAACAAAGGATCCAGAATATAGAACAACACCCTCAGGCGTGAGCGTTGC
GACTTTTACTTTAGCAGTAAATCGTACGTTTACAAATGCGCAAGGGGAACGCGAAGCAGATTTCATTAACTGTGTAGTTT
TTAGAAAACAAGCAGAAAATGTGAATAATTACTTATCAAAAGGTAGTTTAGCTGGCGTTGACGGTCGCATACAATCACGT
AACTATGAAAACCAAGAAGGGCGTCGTGTGTTTGTCACTGAAGTTGTTTGTGACAGCGTTCAATTCCTTGAACCGAAAAA
TCAAAACCAACGTCACAATCAGTCTTCCGGTAATAATTTCCAAGATTATGGACAAGGTTTTGGTGGTCAACAAGCAGGTC
AAAACACGTCATCTTATCAAAATAATAACAACAACAATTCATCAAACTCAGGTCAATCTGATAATCCTTTTGCGAATGCA
AATGGACCGATTGATATCAGTGATGATGACTTACCGTTCTAA
ATGATAAACAGAGTTGTTTTAGTAGGTCGTTTAACAAAGGATCCAGAATATAGAACAACACCCTCAGGCGTGAGCGTTGC
GACTTTTACTTTAGCAGTAAATCGTACGTTTACAAATGCGCAAGGGGAACGCGAAGCAGATTTCATTAACTGTGTAGTTT
TTAGAAAACAAGCAGAAAATGTGAATAATTACTTATCAAAAGGTAGTTTAGCTGGCGTTGACGGTCGCATACAATCACGT
AACTATGAAAACCAAGAAGGGCGTCGTGTGTTTGTCACTGAAGTTGTTTGTGACAGCGTTCAATTCCTTGAACCGAAAAA
TCAAAACCAACGTCACAATCAGTCTTCCGGTAATAATTTCCAAGATTATGGACAAGGTTTTGGTGGTCAACAAGCAGGTC
AAAACACGTCATCTTATCAAAATAATAACAACAACAATTCATCAAACTCAGGTCAATCTGATAATCCTTTTGCGAATGCA
AATGGACCGATTGATATCAGTGATGATGACTTACCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
63.128 |
100 |
0.653 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
57.471 |
100 |
0.578 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.091 |
63.584 |
0.376 |
| ssb | Glaesserella parasuis strain SC1401 |
34.946 |
100 |
0.376 |