Detailed information NTG0730648

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: N5O82_RS02900
• Genome accession: NZ_CP104580
• Coordinates: 632703..633767 (+)
• Length: 354 a.a.
• NCBI ID: WP_013981650.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain GD04120
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 627703..638767

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N5O82_RS02885 (N5O82_02885)	-	627830..628624 (+)	795	WP_125886343.1	thermonuclease family protein	-
N5O82_RS02890 (N5O82_02890)	-	628766..630034 (+)	1269	WP_011911783.1	malic enzyme-like NAD(P)-binding protein	-
N5O82_RS02895 (N5O82_02895)	-	630100..632523 (-)	2424	WP_045159369.1	penicillin-binding protein 1A	-
N5O82_RS02900 (N5O82_02900)	comM	632703..633767 (+)	1065	WP_013981650.1	pilus assembly protein PilM	Machinery gene
N5O82_RS02905 (N5O82_02905)	pilN	633767..634339 (+)	573	WP_084902466.1	type 4a pilus biogenesis protein PilN	-
N5O82_RS02910 (N5O82_02910)	pilO	634336..634959 (+)	624	WP_053527825.1	type 4a pilus biogenesis protein PilO	-
N5O82_RS02915 (N5O82_02915)	pilP	634956..635483 (+)	528	WP_053527826.1	type 4a pilus biogenesis lipoprotein PilP	-
N5O82_RS02920 (N5O82_02920)	pilQ	635537..637615 (+)	2079	WP_053527827.1	type IV pilus secretin PilQ	Machinery gene
N5O82_RS02925 (N5O82_02925)	aroK	637622..638167 (+)	546	WP_053527828.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37744.28 Da
• Isoelectric Point: 4.6880

>NTDB_id=730648 N5O82_RS02900 WP_013981650.1 632703..633767(+) (comM) [Stutzerimonas stutzeri strain GD04120]
MLGLFTKKANTLLGIDISSTSVKLLELSRSGNRYRVEAYAVEPLPPNAVVEKNIAELEGVGQALQRVVAKAKTGCKSAVV
AVSGSAVITKMIEMDAGLSDEELENQLKIEADQYIPYPLEEVAIDFEVQGPAPRAPGRVEVLLAACRKENVEIREAALAL
AGLTAKVVDVEAYALERSYGLLASQLGTAHGELTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSQ
EEAGLAKKQGGLPDDYDSEVLLPFKEAVVQQVSRSLQFFFAAGQFHDVDCILLAGGTASIPGLDHMIQQKIGTQTLVANP
FADMALSGKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=730648 N5O82_RS02900 WP_013981650.1 632703..633767(+) (comM) [Stutzerimonas stutzeri strain GD04120]
GTGCTAGGGCTCTTCACTAAGAAAGCGAACACGCTGCTTGGGATCGATATCAGTTCGACCTCAGTCAAGCTCCTCGAATT
AAGTCGATCGGGTAATCGGTACCGCGTCGAGGCTTATGCCGTCGAGCCGCTACCGCCGAATGCCGTCGTCGAAAAGAACA
TCGCCGAACTTGAGGGTGTCGGTCAGGCCCTGCAGCGAGTCGTTGCCAAGGCCAAGACCGGCTGCAAGTCCGCTGTTGTC
GCTGTCTCCGGGTCTGCCGTCATCACAAAGATGATTGAAATGGATGCCGGGCTTTCTGATGAAGAGCTCGAGAACCAGCT
CAAGATCGAGGCGGATCAGTACATCCCCTACCCACTGGAGGAAGTCGCGATCGACTTCGAGGTGCAAGGTCCTGCGCCTC
GCGCGCCTGGCAGGGTAGAGGTTCTCCTCGCCGCTTGCCGTAAAGAGAATGTCGAGATCCGTGAAGCCGCGCTGGCCTTG
GCCGGGCTTACCGCCAAAGTGGTGGATGTCGAGGCCTATGCGCTTGAACGCTCCTATGGGTTGCTCGCTTCACAGCTGGG
TACAGCGCACGGCGAGCTGACCGTTGCCGTCGTCGACATCGGCGCGACCATGACAACCCTGAGCGTGCTGCATAACGGGC
GTACCATCTACACGCGCGAGCAGCTGTTCGGTGGCCGCCAACTGACCGAAGAGATCCAGCGCCGCTACGGTCTGTCTCAG
GAAGAAGCCGGCCTTGCCAAGAAGCAAGGTGGTCTCCCAGATGACTACGACAGTGAAGTCCTGCTTCCGTTCAAGGAGGC
GGTGGTGCAGCAGGTATCCCGCTCATTGCAGTTCTTCTTCGCTGCAGGGCAGTTCCACGACGTCGACTGCATTCTGCTCG
CGGGCGGGACGGCCTCCATTCCAGGTCTCGATCACATGATTCAGCAAAAGATCGGAACGCAAACTCTAGTGGCCAATCCT
TTCGCCGATATGGCTTTGAGCGGCAAGGTGAACGCCGGGGCGCTGGCCAGCGATGCGCCTGCATTAATGATTGCATGCGG
TTTGGCGCTGAGGAGCTTTGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	55.932	100	0.559
pilM	Acinetobacter baumannii D1279779	55.932	100	0.559
comM	Acinetobacter baylyi ADP1	53.39	100	0.534
pilM	Legionella pneumophila strain ERS1305867	46.328	100	0.463