Detailed information NTG0729456

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: N4Q31_RS16495
• Genome accession: NZ_CP104391
• Coordinates: 3188554..3189729 (-)
• Length: 391 a.a.
• NCBI ID: WP_260774922.1
• Uniprot ID: -
• Organism: Bacillus safensis strain GX-H6
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3183554..3194729

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N4Q31_RS16465 (N4Q31_16465)	-	3183721..3184140 (-)	420	WP_039181808.1	TIGR03826 family flagellar region protein	-
N4Q31_RS16470 (N4Q31_16470)	comFC	3184197..3184853 (-)	657	WP_231730869.1	ComF family protein	Machinery gene
N4Q31_RS16475 (N4Q31_16475)	-	3184880..3185173 (-)	294	WP_059376485.1	late competence development ComFB family protein	-
N4Q31_RS16480 (N4Q31_16480)	comFA	3185223..3186620 (-)	1398	WP_391509951.1	DEAD/DEAH box helicase	Machinery gene
N4Q31_RS16485 (N4Q31_16485)	-	3186741..3187583 (-)	843	WP_039181815.1	DegV family protein	-
N4Q31_RS16490 (N4Q31_16490)	degU	3187800..3188489 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
N4Q31_RS16495 (N4Q31_16495)	degS	3188554..3189729 (-)	1176	WP_260774922.1	sensor histidine kinase	Regulator
N4Q31_RS16500 (N4Q31_16500)	-	3189951..3190619 (+)	669	WP_251181032.1	YigZ family protein	-
N4Q31_RS16505 (N4Q31_16505)	-	3190604..3191695 (+)	1092	WP_034623744.1	LCP family protein	-
N4Q31_RS16510 (N4Q31_16510)	-	3191731..3192798 (-)	1068	WP_034660156.1	glycosyltransferase family 4 protein	-
N4Q31_RS16515 (N4Q31_16515)	-	3192933..3194132 (-)	1200	WP_391509952.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=729456 N4Q31_RS16495 WP_260774922.1 3188554..3189729(-) (degS) [Bacillus safensis strain GX-H6]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTLDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=729456 N4Q31_RS16495 WP_260774922.1 3188554..3189729(-) (degS) [Bacillus safensis strain GX-H6]
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGAATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTGAAGCAAATCAAGCAACAAG
TAAACGAAGTAATTGATTTTGGGGATAAGCTGGAAGTCCATACAAGACATGCTAGAAATCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGGGAGGCCTACGAAAAAGCACATAACTTGCAGGTGGAACTCACCATGAT
TCAGCAGCGCGAGAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGACGATTACTAAGCTTGCAAGACGTCATAGAAC
GCTCTGAAACCCTTGTGAGTCAGATTACAGTTGTTCTCAACTATCTCAACCAGGATTTACGCCAGGTCGGCGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGGCTCAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGAGTGTCTCGGGA
AATTCATGACGGCCCTGCTCAAATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGGATTTTTAGAGACCGCG
GTACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTCAGACAAAATGTGCGAAATGCACTGTACGAAGTAAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTGATTCCAACACTAAGAAAATACTTAAACACAATTGAAGAATA
TGATGGGAAAACCAAAATTACGTTCCAATGCCTAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTAGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTAAAGCATTCAGAAGCTGAAGAAATCTCTGTCAAAGTAGAAGTA
ACGAAAGACTTTGTGACCTTAATTATTAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCTTAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCACTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.195	98.465	0.839