Detailed information NTG0728940

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: N4T38_RS01580
• Genome accession: NZ_CP104351
• Coordinates: 334124..335182 (+)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain 2021CK-01335
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 329124..340182

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N4T38_RS01565 (N4T38_01565)	-	330230..330562 (+)	333	WP_000169601.1	hypothetical protein	-
N4T38_RS01570 (N4T38_01570)	-	330565..331389 (+)	825	WP_086242007.1	putative RNA methyltransferase	-
N4T38_RS01575 (N4T38_01575)	ponA	331407..333962 (-)	2556	WP_000736683.1	penicillin-binding protein PBP1a	-
N4T38_RS01580 (N4T38_01580)	pilM	334124..335182 (+)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
N4T38_RS01585 (N4T38_01585)	pilN	335182..335823 (+)	642	WP_000201227.1	PilN domain-containing protein	Machinery gene
N4T38_RS01590 (N4T38_01590)	pilO	335820..336560 (+)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
N4T38_RS01595 (N4T38_01595)	pilP	336571..337098 (+)	528	WP_000695058.1	pilus assembly protein PilP	Machinery gene
N4T38_RS01600 (N4T38_01600)	pilQ	337161..339326 (+)	2166	WP_001017038.1	type IV pilus secretin PilQ family protein	Machinery gene
N4T38_RS01605 (N4T38_01605)	aroK	339338..339907 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=728940 N4T38_RS01580 WP_002014066.1 334124..335182(+) (pilM) [Acinetobacter baumannii strain 2021CK-01335]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=728940 N4T38_RS01580 WP_002014066.1 334124..335182(+) (pilM) [Acinetobacter baumannii strain 2021CK-01335]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAATGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCGGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCCTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGTCATACTATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTCGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCAGAGCGAAAAAAGATCGTTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGCTCACTACAATTTTTCTTTTCCTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCATTCTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423