Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | N2K92_RS00135 | Genome accession | NZ_CP104297 |
| Coordinates | 22265..22618 (+) | Length | 117 a.a. |
| NCBI ID | WP_071211529.1 | Uniprot ID | A0A1S2G1T5 |
| Organism | Acinetobacter baumannii strain ZHOU | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 7..24091 | 22265..22618 | within | 0 |
Gene organization within MGE regions
Location: 7..24091
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N2K92_RS00010 (N2K92_00010) | - | 3102..3596 (+) | 495 | WP_062936696.1 | hypothetical protein | - |
| N2K92_RS00015 (N2K92_00015) | - | 3706..4875 (+) | 1170 | WP_000785699.1 | phage tail sheath protein | - |
| N2K92_RS00020 (N2K92_00020) | - | 4891..5406 (+) | 516 | WP_001207577.1 | phage major tail tube protein | - |
| N2K92_RS00025 (N2K92_00025) | - | 5472..5837 (+) | 366 | WP_062936698.1 | phage tail assembly protein | - |
| N2K92_RS00030 (N2K92_00030) | - | 5897..5968 (+) | 72 | WP_249308986.1 | GpE family phage tail protein | - |
| N2K92_RS00035 (N2K92_00035) | - | 5965..9885 (+) | 3921 | WP_071211539.1 | phage tail protein | - |
| N2K92_RS00040 (N2K92_00040) | - | 9902..10321 (+) | 420 | WP_000979932.1 | phage tail protein | - |
| N2K92_RS00045 (N2K92_00045) | - | 10324..11544 (+) | 1221 | WP_071211538.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| N2K92_RS00050 (N2K92_00050) | - | 11541..12332 (-) | 792 | WP_071211537.1 | DNA adenine methylase | - |
| N2K92_RS00060 (N2K92_00060) | - | 12686..12898 (+) | 213 | WP_249308988.1 | ogr/Delta-like zinc finger family protein | - |
| N2K92_RS00065 (N2K92_00065) | - | 13010..13480 (-) | 471 | WP_071211536.1 | hypothetical protein | - |
| N2K92_RS00070 (N2K92_00070) | - | 13482..14093 (-) | 612 | WP_031966861.1 | hypothetical protein | - |
| N2K92_RS00075 (N2K92_00075) | - | 14099..14632 (-) | 534 | WP_071211535.1 | PAAR domain-containing protein | - |
| N2K92_RS00080 (N2K92_00080) | - | 14689..15834 (-) | 1146 | WP_071211534.1 | hypothetical protein | - |
| N2K92_RS00085 (N2K92_00085) | - | 16190..16360 (+) | 171 | WP_171259127.1 | hypothetical protein | - |
| N2K92_RS00090 (N2K92_00090) | - | 16371..16931 (+) | 561 | WP_071211547.1 | hypothetical protein | - |
| N2K92_RS00095 (N2K92_00095) | - | 16973..17317 (-) | 345 | WP_071211533.1 | hypothetical protein | - |
| N2K92_RS00100 (N2K92_00100) | - | 17400..17603 (+) | 204 | WP_071211532.1 | hypothetical protein | - |
| N2K92_RS00105 (N2K92_00105) | - | 17600..17833 (+) | 234 | WP_000023425.1 | hypothetical protein | - |
| N2K92_RS00110 (N2K92_00110) | - | 17836..18018 (+) | 183 | WP_001133583.1 | hypothetical protein | - |
| N2K92_RS00115 (N2K92_00115) | - | 18033..20750 (+) | 2718 | WP_071211531.1 | toprim domain-containing protein | - |
| N2K92_RS00120 (N2K92_00120) | - | 20775..21371 (+) | 597 | WP_000274818.1 | hypothetical protein | - |
| N2K92_RS00125 (N2K92_00125) | - | 21439..21957 (+) | 519 | WP_071211530.1 | hypothetical protein | - |
| N2K92_RS00130 (N2K92_00130) | - | 21960..22277 (+) | 318 | WP_000049659.1 | hypothetical protein | - |
| N2K92_RS00135 (N2K92_00135) | ssb | 22265..22618 (+) | 354 | WP_071211529.1 | single-stranded DNA-binding protein | Machinery gene |
| N2K92_RS00140 (N2K92_00140) | - | 22639..22842 (+) | 204 | WP_071211528.1 | hypothetical protein | - |
| N2K92_RS00145 (N2K92_00145) | - | 22931..24091 (+) | 1161 | WP_001272508.1 | tyrosine-type recombinase/integrase | - |
Sequence
Protein
Download Length: 117 a.a. Molecular weight: 13331.01 Da Isoelectric Point: 10.1439
>NTDB_id=728410 N2K92_RS00135 WP_071211529.1 22265..22618(+) (ssb) [Acinetobacter baumannii strain ZHOU]
MRGVNKVILVGSLGADPITRQFPNGSSVTNFSIATSEKWQDKRTGDWIENTEWHRIVANNKLGEIAQKFLKKGSKVFIEG
SLRTRQWTDQNQNQFTVTEVRADHLQMLDSLPQANPY
MRGVNKVILVGSLGADPITRQFPNGSSVTNFSIATSEKWQDKRTGDWIENTEWHRIVANNKLGEIAQKFLKKGSKVFIEG
SLRTRQWTDQNQNQFTVTEVRADHLQMLDSLPQANPY
Nucleotide
Download Length: 354 bp
>NTDB_id=728410 N2K92_RS00135 WP_071211529.1 22265..22618(+) (ssb) [Acinetobacter baumannii strain ZHOU]
ATGCGTGGTGTAAATAAAGTCATTCTTGTAGGGAGTCTCGGAGCTGATCCTATTACAAGACAATTTCCGAATGGTTCTTC
AGTAACAAACTTTTCTATAGCTACTTCAGAAAAGTGGCAGGACAAACGTACTGGTGATTGGATAGAGAATACTGAGTGGC
ATCGAATTGTGGCTAACAACAAATTAGGAGAAATTGCTCAAAAATTTCTAAAAAAAGGTTCAAAAGTTTTCATCGAAGGC
TCTTTGCGTACACGTCAGTGGACTGATCAAAATCAAAATCAATTCACTGTGACAGAAGTAAGGGCAGATCACTTACAAAT
GCTGGATAGTCTTCCACAAGCAAACCCTTATTGA
ATGCGTGGTGTAAATAAAGTCATTCTTGTAGGGAGTCTCGGAGCTGATCCTATTACAAGACAATTTCCGAATGGTTCTTC
AGTAACAAACTTTTCTATAGCTACTTCAGAAAAGTGGCAGGACAAACGTACTGGTGATTGGATAGAGAATACTGAGTGGC
ATCGAATTGTGGCTAACAACAAATTAGGAGAAATTGCTCAAAAATTTCTAAAAAAAGGTTCAAAAGTTTTCATCGAAGGC
TCTTTGCGTACACGTCAGTGGACTGATCAAAATCAAAATCAATTCACTGTGACAGAAGTAAGGGCAGATCACTTACAAAT
GCTGGATAGTCTTCCACAAGCAAACCCTTATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
56.364 |
94.017 |
0.53 |
| ssb | Vibrio cholerae strain A1552 |
55.556 |
84.615 |
0.47 |
| ssb | Neisseria meningitidis MC58 |
46.667 |
89.744 |
0.419 |
| ssb | Neisseria gonorrhoeae MS11 |
46.667 |
89.744 |
0.419 |