Detailed information    

insolico Bioinformatically predicted

Overview

Name   ciaH   Type   Regulator
Locus tag   N2A96_RS05680 Genome accession   NZ_CP104047
Coordinates   1098603..1099907 (-) Length   434 a.a.
NCBI ID   WP_003106956.1    Uniprot ID   -
Organism   Streptococcus parauberis strain KSP10     
Function   Required for optimal comC expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1093603..1104907
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N2A96_RS05650 (N2A96_05650) - 1094125..1094514 (-) 390 WP_003108421.1 cytidine deaminase -
  N2A96_RS05655 (N2A96_05655) deoC 1094501..1095163 (-) 663 WP_003103647.1 deoxyribose-phosphate aldolase -
  N2A96_RS05660 (N2A96_05660) - 1095177..1096454 (-) 1278 WP_003102832.1 pyrimidine-nucleoside phosphorylase -
  N2A96_RS05665 (N2A96_05665) - 1096441..1097040 (-) 600 WP_003106951.1 class I SAM-dependent methyltransferase -
  N2A96_RS05670 (N2A96_05670) coaA 1097291..1098211 (+) 921 WP_003106953.1 type I pantothenate kinase -
  N2A96_RS05675 (N2A96_05675) rpsT 1098280..1098513 (+) 234 WP_003105398.1 30S ribosomal protein S20 -
  N2A96_RS05680 (N2A96_05680) ciaH 1098603..1099907 (-) 1305 WP_003106956.1 cell wall metabolism sensor histidine kinase WalK Regulator
  N2A96_RS05685 (N2A96_05685) ciaR 1099900..1100574 (-) 675 WP_003106958.1 response regulator transcription factor Regulator
  N2A96_RS05690 (N2A96_05690) - 1100692..1103229 (-) 2538 WP_003106959.1 M1 family metallopeptidase -
  N2A96_RS05695 (N2A96_05695) phoU 1103293..1103946 (-) 654 WP_003103398.1 phosphate signaling complex protein PhoU -
  N2A96_RS05700 (N2A96_05700) pstB 1104012..1104770 (-) 759 WP_003104047.1 phosphate ABC transporter ATP-binding protein PstB -

Sequence

Protein


Download         Length: 434 a.a.        Molecular weight: 49715.07 Da        Isoelectric Point: 9.1102

>NTDB_id=727306 N2A96_RS05680 WP_003106956.1 1098603..1099907(-) (ciaH) [Streptococcus parauberis strain KSP10]
MNKIKLFLKSGSFDHFFHFFTVFTSIFVIMTFIILQIMRFGVYSTVDNSLNLVAKHSTLYADKAMEQISLFNFDNQNFNE
ATSRYKSSLITDPVGNTDIILYSADGTILNPFDAFSNLNYFKLNPHQLNKIVTQKKTNFYGHEEKFHTVTIKVQSNNYPA
VSYLSAVANVDQLDRANERYENIIILVMSIFWLISIFASIYLAYWSRKPIVESFEKQKSFVENASHELRTPLAVLQNRLE
SLFRKPNETILENSEAIASSLEEVRNMRILTTNLLNLARRDDGIDVKKEEIGASFFDPIFENYKLIAEENGIKFQSFNEV
SYKFVTDKALLKQLITILFDNAVKYTAENGNIVILVKTTEKSLLLRVSDNGIGISNSDKERIFDRFYRVDKARTRQIGGF
GLGLALAKQIVVTLKGDITVKDNFPQGTIFQVKL

Nucleotide


Download         Length: 1305 bp        

>NTDB_id=727306 N2A96_RS05680 WP_003106956.1 1098603..1099907(-) (ciaH) [Streptococcus parauberis strain KSP10]
ATGAATAAGATAAAATTATTTTTAAAGTCAGGGAGCTTTGATCATTTCTTTCATTTCTTCACTGTTTTTACAAGTATTTT
TGTTATTATGACTTTTATCATATTACAAATTATGCGCTTTGGTGTCTATTCAACAGTTGATAATAGTTTGAATCTTGTTG
CAAAACACTCTACTCTTTATGCTGATAAAGCGATGGAACAGATTTCACTCTTTAATTTTGATAATCAGAATTTTAATGAA
GCGACGAGTCGCTATAAGTCATCTTTGATTACTGATCCTGTTGGTAATACTGACATTATCTTATATAGTGCTGATGGAAC
AATTTTAAATCCCTTTGATGCTTTTTCAAACTTAAATTATTTTAAATTAAATCCACATCAACTTAATAAGATAGTTACCC
AAAAAAAAACAAATTTTTACGGACATGAAGAAAAGTTTCATACTGTCACCATTAAAGTTCAATCAAATAATTATCCTGCC
GTTTCTTATCTCAGTGCGGTGGCAAATGTTGACCAACTTGATCGGGCTAATGAGCGGTATGAGAATATTATTATATTGGT
TATGAGTATCTTTTGGTTAATTTCCATTTTTGCAAGTATCTATTTAGCTTATTGGAGTCGAAAACCTATTGTTGAGAGTT
TTGAAAAGCAGAAGTCATTTGTTGAAAATGCTAGTCATGAATTAAGGACGCCTTTGGCTGTGTTACAAAATCGCTTAGAA
TCTTTGTTTAGGAAGCCAAACGAGACTATCTTAGAGAATAGCGAAGCCATTGCTTCAAGTCTTGAAGAAGTAAGAAACAT
GCGTATTTTGACGACTAATCTCCTAAATTTAGCTAGACGAGATGATGGGATTGATGTAAAGAAAGAAGAAATTGGCGCTT
CATTCTTTGATCCTATTTTTGAAAATTATAAGCTAATTGCGGAAGAAAATGGGATAAAATTTCAATCATTTAACGAAGTT
TCCTATAAATTTGTCACTGATAAAGCTTTGTTAAAACAATTAATAACCATCTTATTTGATAATGCTGTGAAATATACAGC
TGAAAATGGGAATATTGTAATCCTCGTTAAAACGACTGAGAAATCACTCTTACTTCGTGTTAGTGATAATGGCATAGGAA
TTTCTAATTCAGATAAAGAGAGAATTTTTGATCGCTTTTATCGGGTTGATAAAGCTAGGACGCGTCAAATTGGTGGATTC
GGTCTAGGCCTAGCATTAGCTAAACAGATTGTGGTCACTTTAAAAGGTGATATTACAGTCAAAGATAATTTTCCTCAAGG
AACTATTTTTCAGGTCAAATTATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(327-434)

His Kinase A (phospho-acceptor) domain (HisKA)

(218-283)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ciaH Streptococcus mutans UA159

56.398

97.235

0.548
  ciaH Streptococcus pneumoniae Rx1

50

100

0.505
  ciaH Streptococcus pneumoniae D39

50

100

0.505
  ciaH Streptococcus pneumoniae R6

50

100

0.505
  ciaH Streptococcus pneumoniae TIGR4

50

100

0.505