Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   P1I87_RS06450 Genome accession   NZ_CP119576
Coordinates   1225271..1225939 (-) Length   222 a.a.
NCBI ID   WP_000076874.1    Uniprot ID   X5JZS1
Organism   Streptococcus agalactiae strain Guangzhou-SAG092     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1220271..1230939
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P1I87_RS06430 (P1I87_06430) - 1220301..1221074 (+) 774 WP_000622398.1 DUF3307 domain-containing protein -
  P1I87_RS06435 (P1I87_06435) - 1221107..1222770 (-) 1664 Protein_1190 peptide ABC transporter substrate-binding protein -
  P1I87_RS06440 (P1I87_06440) xerS 1223223..1224293 (+) 1071 WP_000817935.1 tyrosine recombinase XerS Machinery gene
  P1I87_RS06445 (P1I87_06445) - 1224336..1225274 (-) 939 WP_000620981.1 sensor histidine kinase -
  P1I87_RS06450 (P1I87_06450) braR 1225271..1225939 (-) 669 WP_000076874.1 response regulator transcription factor Regulator
  P1I87_RS06455 (P1I87_06455) - 1226049..1228004 (-) 1956 WP_000499553.1 FtsX-like permease family protein -
  P1I87_RS06460 (P1I87_06460) - 1228006..1228758 (-) 753 WP_000923535.1 ABC transporter ATP-binding protein -
  P1I87_RS06465 (P1I87_06465) - 1228826..1229746 (-) 921 WP_276131332.1 S41 family peptidase -
  P1I87_RS06470 (P1I87_06470) - 1229912..1230401 (+) 490 Protein_1197 PASTA domain-containing protein -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25403.45 Da        Isoelectric Point: 5.0693

>NTDB_id=726663 P1I87_RS06450 WP_000076874.1 1225271..1225939(-) (braR) [Streptococcus agalactiae strain Guangzhou-SAG092]
MSQEQGKIYIVEDDMTIVSLLKDHLSASYHVSSVSNFRDVKQEIIAFQPDLILMDITLPYFNGFYWTAELRKFLTIPIIF
ISSSNDEMDMVMALNMGGDDFISKPFSLAVLDAKLTAILRRSQQFIQQELTFGGFTLTREGLLSSQDKEVILSPTENKIL
SILLMHPKQVVSKESLLEKLWENDSFIDQNTLNVNMTRLRKKIVPIGFDYIHTVRGVGYLLQ

Nucleotide


Download         Length: 669 bp        

>NTDB_id=726663 P1I87_RS06450 WP_000076874.1 1225271..1225939(-) (braR) [Streptococcus agalactiae strain Guangzhou-SAG092]
ATGTCACAAGAGCAAGGAAAAATTTATATTGTAGAAGATGATATGACGATTGTGTCACTTTTAAAAGATCATTTATCAGC
TAGCTATCATGTCTCTAGTGTCAGCAATTTTCGTGATGTGAAACAAGAAATTATCGCATTTCAACCCGATTTGATACTAA
TGGATATTACGTTACCCTATTTTAATGGTTTTTACTGGACTGCAGAATTGCGTAAGTTTTTAACAATTCCTATTATTTTC
ATTTCATCTAGTAATGATGAAATGGATATGGTTATGGCATTAAATATGGGGGGTGATGACTTTATTTCAAAACCATTCTC
TCTAGCTGTATTAGATGCTAAGCTAACTGCTATTTTAAGGAGAAGTCAACAATTTATCCAACAGGAATTAACTTTTGGGG
GATTTACGTTGACAAGAGAAGGGTTATTGTCTAGCCAAGATAAAGAGGTTATTTTATCGCCAACAGAAAATAAAATCCTA
TCTATCTTGCTCATGCATCCTAAACAAGTAGTCTCAAAAGAGTCTCTATTAGAGAAACTTTGGGAAAATGATAGTTTTAT
TGATCAAAATACACTTAATGTTAATATGACACGCTTACGTAAAAAAATTGTCCCAATAGGTTTTGATTACATTCATACAG
TGAGAGGAGTTGGGTATTTACTACAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(8-115)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5DCL
  PDB 5DCM

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.248

98.198

0.464