Detailed information NTG0072654

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: J3989_RS06675
• Genome accession: NZ_AP024489
• Coordinates: 1408514..1409545 (-)
• Length: 343 a.a.
• NCBI ID: WP_101115838.1
• Uniprot ID: -
• Organism: Neisseria meningitidis strain NIID777
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1403514..1414545

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J3989_RS06650 (NMNIID777_12380)	-	1404906..1405520 (+)	615	WP_014575380.1	molybdenum cofactor guanylyltransferase	-
J3989_RS06655 (NMNIID777_12390)	-	1405683..1406300 (+)	618	WP_002217135.1	riboflavin synthase	-
J3989_RS06660 (NMNIID777_12400)	-	1406308..1407171 (+)	864	WP_002217136.1	ATP-binding protein	-
J3989_RS06665 (NMNIID777_12410)	-	1407184..1407618 (-)	435	WP_002213489.1	Spy/CpxP family protein refolding chaperone	-
J3989_RS06670 (NMNIID777_12420)	rpe	1407764..1408447 (+)	684	WP_061725119.1	ribulose-phosphate 3-epimerase	-
J3989_RS06675 (NMNIID777_12430)	ruvB	1408514..1409545 (-)	1032	WP_101115838.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
J3989_RS06680 (NMNIID777_12440)	-	1409627..1409935 (-)	309	WP_002232489.1	hypothetical protein	-
J3989_RS06685 (NMNIID777_12450)	-	1410158..1411411 (-)	1254	WP_101115837.1	multifunctional CCA addition/repair protein	-
J3989_RS06690 (NMNIID777_12460)	-	1411483..1413111 (-)	1629	WP_002232487.1	ABC-F family ATPase	-
J3989_RS06695 (NMNIID777_12470)	-	1413261..1413635 (+)	375	WP_101126700.1	arsenate reductase	-

Sequence

Protein

• Length: 343 a.a.
• Molecular weight: 37648.07 Da
• Isoelectric Point: 5.0462

>NTDB_id=72654 J3989_RS06675 WP_101115838.1 1408514..1409545(-) (ruvB) [Neisseria meningitidis strain NIID777]
MLQTDNLTAAQPQRIVAAQTASAQEELLERALRPKTLDDYIGQDKAKEQLAIFIQAAKKRGEALDHTLLFGPPGLGKTTL
AHIIAKELGVNLRQTSGPVLERAGDLAALLTNLDPHDVLFIDEIHRLSPVVEEILYPALEDYRLDIMIGEGPAARSVKID
LPPFTLVGATTRAGMLTNPLRDRFGIVSRLEFYENRDLTTIVSRSAQLLQLDMSEEGAEEIAKRSRGTPRIANRLLRRVR
DFADVKNNGTIDGGIADAALSMLDVDAQGLDVMDRKFLEAVLHKFGGGPVGLDNVAAAIGESTDTIEDVIEPYLIQQGFL
QRTPRGRMATERAYLHFGLPVEK

Nucleotide

• Length: 1032 bp

>NTDB_id=72654 J3989_RS06675 WP_101115838.1 1408514..1409545(-) (ruvB) [Neisseria meningitidis strain NIID777]
ATGCTGCAAACCGACAACCTGACCGCCGCGCAACCGCAACGCATCGTTGCCGCCCAAACCGCCTCCGCACAGGAAGAACT
GCTCGAACGCGCCCTGCGTCCTAAAACGCTGGACGACTATATCGGGCAAGACAAAGCCAAAGAACAGCTTGCCATCTTCA
TCCAAGCCGCCAAAAAACGCGGCGAAGCCCTAGACCACACCCTGCTCTTCGGCCCGCCTGGACTGGGCAAAACCACACTG
GCGCACATCATCGCCAAAGAGCTGGGCGTCAACCTGCGCCAAACCAGCGGCCCCGTCCTCGAACGCGCAGGCGACCTCGC
CGCCCTTTTGACCAACCTTGATCCGCACGATGTATTGTTCATCGACGAAATCCACCGCCTCAGCCCTGTTGTCGAAGAAA
TCCTCTATCCCGCGCTCGAAGACTACCGGCTCGACATTATGATAGGCGAAGGGCCTGCCGCCCGTTCCGTCAAAATCGAC
CTGCCGCCCTTCACCCTCGTCGGCGCGACCACCCGCGCCGGTATGCTGACCAATCCGTTGCGCGACCGCTTCGGCATCGT
CTCCCGCCTTGAGTTTTACGAAAACCGAGACCTTACCACCATCGTCAGCCGTTCGGCACAACTGTTGCAGCTCGATATGT
CCGAAGAAGGCGCGGAAGAAATCGCCAAACGCAGCCGCGGTACGCCGCGCATCGCCAACCGCCTGTTGCGACGCGTGCGC
GATTTCGCCGACGTGAAAAACAACGGCACAATCGACGGCGGCATCGCCGATGCCGCTTTAAGCATGCTGGACGTGGACGC
GCAGGGGCTGGACGTGATGGACAGGAAATTTCTCGAAGCCGTTTTGCACAAATTCGGCGGCGGCCCGGTCGGTTTGGACA
ATGTTGCCGCCGCCATCGGCGAATCAACAGACACCATCGAAGACGTTATCGAACCCTACCTTATCCAACAAGGCTTCCTG
CAACGCACCCCGCGCGGCAGGATGGCGACCGAACGCGCCTACCTGCATTTCGGGCTGCCCGTCGAAAAATAA

Domains

Predicted by InterProScan.

• RuvB C-terminal winged helix domain (WHD_RuvB) (268-337)

• RuvB AAA lid domain (AAA_lid_4) (193-266)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (32-190)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Bacillus subtilis subsp. subtilis str. 168	60.55	95.335	0.577
ruvB	Streptococcus pneumoniae TIGR4	62.739	91.545	0.574
ruvB	Streptococcus pneumoniae R6	62.739	91.545	0.574
ruvB	Streptococcus pneumoniae D39	62.739	91.545	0.574
ruvB	Synechocystis sp. PCC 6803	54.878	95.627	0.525
ruvB	Helicobacter pylori 26695	57.372	90.962	0.522