Detailed information NTG0725546

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: P0097_RS21410
• Genome accession: NZ_CP119187
• Coordinates: 4423664..4424689 (+)
• Length: 341 a.a.
• NCBI ID: WP_081508874.1
• Uniprot ID: -
• Organism: Escherichia coli strain PA11
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4418664..4429689

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P0097_RS21390 (P0097_21380)	metJ	4419726..4420043 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
P0097_RS21395 (P0097_21385)	yiiX	4420227..4420834 (+)	608	Protein_4169	YiiX family permuted papain-like enzyme	-
P0097_RS21400 (P0097_21390)	rpmE	4420895..4421107 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
P0097_RS21405 (P0097_21395)	priA	4421310..4423508 (+)	2199	WP_001400571.1	primosomal protein N'	Machinery gene
P0097_RS21410 (P0097_21400)	cytR	4423664..4424689 (+)	1026	WP_081508874.1	DNA-binding transcriptional regulator CytR	Regulator
P0097_RS21415 (P0097_21405)	ftsN	4424781..4425740 (+)	960	WP_000068828.1	cell division protein FtsN	-
P0097_RS21420 (P0097_21410)	hslV	4425833..4426363 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
P0097_RS21425 (P0097_21415)	hslU	4426373..4427704 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
P0097_RS21430 (P0097_21420)	menA	4427771..4428697 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
P0097_RS21435 (P0097_21425)	rraA	4428790..4429275 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
P0097_RS21440 (P0097_21430)	zapB	4429360..4429605 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37834.75 Da
• Isoelectric Point: 6.3842

>NTDB_id=725546 P0097_RS21410 WP_081508874.1 4423664..4424689(+) (cytR) [Escherichia coli strain PA11]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNQTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=725546 P0097_RS21410 WP_081508874.1 4423664..4424689(+) (cytR) [Escherichia coli strain PA11]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCAGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625