Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | BUCNMO_RS02200 | Genome accession | NZ_AP019379 |
| Coordinates | 537749..538279 (-) | Length | 176 a.a. |
| NCBI ID | WP_158345198.1 | Uniprot ID | A0A455TAP7 |
| Organism | Buchnera aphidicola (Nipponaphis monzeni) strain Nmo isolate Tokyo2014 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 532749..543279
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BUCNMO_RS02175 (BUCNMO_410) | aroB | 533114..534196 (-) | 1083 | WP_158345191.1 | 3-dehydroquinate synthase | - |
| BUCNMO_RS02180 (BUCNMO_411) | aroK | 534237..534758 (-) | 522 | WP_158345193.1 | shikimate kinase AroK | - |
| BUCNMO_RS02190 (BUCNMO_412) | - | 536063..536638 (-) | 576 | WP_158345195.1 | NifU family protein | - |
| BUCNMO_RS02195 (BUCNMO_413) | - | 536801..537586 (+) | 786 | WP_158345196.1 | alpha/beta fold hydrolase | - |
| BUCNMO_RS02200 (BUCNMO_414) | ssb | 537749..538279 (-) | 531 | WP_158345198.1 | single-stranded DNA-binding protein | Machinery gene |
| BUCNMO_RS02205 (BUCNMO_415) | dnaB | 539298..540698 (+) | 1401 | WP_158345200.1 | replicative DNA helicase | - |
| BUCNMO_RS02210 (BUCNMO_416) | gshB | 541258..542223 (+) | 966 | WP_158345202.1 | glutathione synthase | - |
| BUCNMO_RS02215 (BUCNMO_417) | ruvX | 542682..543089 (+) | 408 | WP_158345204.1 | Holliday junction resolvase RuvX | - |
Sequence
Protein
Download Length: 176 a.a. Molecular weight: 19792.18 Da Isoelectric Point: 8.4288
>NTDB_id=72532 BUCNMO_RS02200 WP_158345198.1 537749..538279(-) (ssb) [Buchnera aphidicola (Nipponaphis monzeni) strain Nmo isolate Tokyo2014]
MASRGVNKVIIIGHLGQDPEIRYMPNGSAVTNINLATSEFWKDKNTGEMKERTEWHRVVIFSKLAEIAKEYLHKGSQVYI
EGSLQTRKWQDQNGVERYITEIVVNIGGTMQMLGTRVASASASKLSDSSANASASNQTKKTNRNKVSINTDQHHYLKKDL
SRSSDIESEFDDEIPF
MASRGVNKVIIIGHLGQDPEIRYMPNGSAVTNINLATSEFWKDKNTGEMKERTEWHRVVIFSKLAEIAKEYLHKGSQVYI
EGSLQTRKWQDQNGVERYITEIVVNIGGTMQMLGTRVASASASKLSDSSANASASNQTKKTNRNKVSINTDQHHYLKKDL
SRSSDIESEFDDEIPF
Nucleotide
Download Length: 531 bp
>NTDB_id=72532 BUCNMO_RS02200 WP_158345198.1 537749..538279(-) (ssb) [Buchnera aphidicola (Nipponaphis monzeni) strain Nmo isolate Tokyo2014]
ATGGCTAGTAGAGGTGTTAACAAAGTTATTATAATTGGTCATTTAGGACAAGATCCAGAAATTCGTTATATGCCGAATGG
TAGTGCAGTTACTAATATTAATTTAGCTACCTCAGAATTTTGGAAAGATAAAAATACAGGTGAAATGAAAGAAAGAACAG
AGTGGCATCGAGTGGTAATATTTAGTAAATTAGCAGAAATTGCAAAAGAATATTTACATAAAGGTTCTCAAGTATATATA
GAAGGTTCTTTACAAACTAGGAAATGGCAAGATCAAAATGGTGTAGAACGTTACATTACAGAAATTGTTGTAAACATTGG
TGGAACAATGCAAATGCTTGGTACTCGAGTTGCCAGTGCTTCTGCATCTAAATTATCAGATTCTTCTGCAAATGCTTCTG
CTAGCAATCAAACAAAGAAAACAAACAGAAATAAAGTATCGATTAATACAGATCAACATCATTATTTAAAAAAAGATCTT
TCTAGAAGCAGTGATATAGAATCAGAATTTGATGACGAAATACCCTTTTAA
ATGGCTAGTAGAGGTGTTAACAAAGTTATTATAATTGGTCATTTAGGACAAGATCCAGAAATTCGTTATATGCCGAATGG
TAGTGCAGTTACTAATATTAATTTAGCTACCTCAGAATTTTGGAAAGATAAAAATACAGGTGAAATGAAAGAAAGAACAG
AGTGGCATCGAGTGGTAATATTTAGTAAATTAGCAGAAATTGCAAAAGAATATTTACATAAAGGTTCTCAAGTATATATA
GAAGGTTCTTTACAAACTAGGAAATGGCAAGATCAAAATGGTGTAGAACGTTACATTACAGAAATTGTTGTAAACATTGG
TGGAACAATGCAAATGCTTGGTACTCGAGTTGCCAGTGCTTCTGCATCTAAATTATCAGATTCTTCTGCAAATGCTTCTG
CTAGCAATCAAACAAAGAAAACAAACAGAAATAAAGTATCGATTAATACAGATCAACATCATTATTTAAAAAAAGATCTT
TCTAGAAGCAGTGATATAGAATCAGAATTTGATGACGAAATACCCTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
53.107 |
100 |
0.534 |
| ssb | Glaesserella parasuis strain SC1401 |
45.856 |
100 |
0.472 |
| ssb | Neisseria gonorrhoeae MS11 |
40.341 |
100 |
0.403 |
| ssb | Neisseria meningitidis MC58 |
40.341 |
100 |
0.403 |