Detailed information NTG0724662

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: NYR93_RS17640
• Genome accession: NZ_CP103769
• Coordinates: 3641245..3642408 (+)
• Length: 387 a.a.
• NCBI ID: WP_264254775.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain ML61
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3636245..3647408

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NYR93_RS17620 (NYR93_17625)	tuaH	3636661..3637857 (+)	1197	WP_024085869.1	teichuronic acid biosynthesis protein TuaH	-
NYR93_RS17625 (NYR93_17630)	-	3637990..3639066 (+)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
NYR93_RS17630 (NYR93_17635)	-	3639156..3640370 (-)	1215	WP_024085868.1	LCP family protein	-
NYR93_RS17635 (NYR93_17640)	-	3640375..3641022 (-)	648	WP_003151384.1	YigZ family protein	-
NYR93_RS17640 (NYR93_17645)	degS	3641245..3642408 (+)	1164	WP_264254775.1	two-component sensor histidine kinase DegS	Regulator
NYR93_RS17645 (NYR93_17650)	degU	3642485..3643174 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
NYR93_RS17650 (NYR93_17655)	-	3643272..3644120 (+)	849	WP_024085866.1	DegV family protein	-
NYR93_RS17655 (NYR93_17660)	comFA	3644228..3645613 (+)	1386	WP_024085865.1	DEAD/DEAH box helicase	Machinery gene
NYR93_RS17660 (NYR93_17665)	-	3645671..3645955 (+)	285	WP_003151389.1	late competence development ComFB family protein	-
NYR93_RS17665 (NYR93_17670)	comFC	3645961..3646650 (+)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
NYR93_RS17670 (NYR93_17675)	-	3646724..3647143 (+)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45028.85 Da
• Isoelectric Point: 7.1378

>NTDB_id=724662 NYR93_RS17640 WP_264254775.1 3641245..3642408(+) (degS) [Bacillus velezensis strain ML61]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSETEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=724662 NYR93_RS17640 WP_264254775.1 3641245..3642408(+) (degS) [Bacillus velezensis strain ML61]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTGAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCTACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAAACAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.065	99.483	0.946