Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   NUW46_RS18850 Genome accession   NZ_CP103058
Coordinates   4076537..4076929 (+) Length   130 a.a.
NCBI ID   WP_008175635.1    Uniprot ID   G6YWX8
Organism   Marinobacter sp. MA     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4071537..4081929
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NUW46_RS18820 (NUW46_18850) - 4071835..4072848 (-) 1014 WP_418140946.1 aspartate carbamoyltransferase catalytic subunit -
  NUW46_RS18825 (NUW46_18855) pyrR 4072876..4073385 (-) 510 WP_136630896.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  NUW46_RS18830 (NUW46_18860) ruvX 4073393..4073815 (-) 423 WP_222465636.1 Holliday junction resolvase RuvX -
  NUW46_RS18835 (NUW46_18865) - 4073808..4074374 (-) 567 WP_418140947.1 YqgE/AlgH family protein -
  NUW46_RS18840 (NUW46_18870) - 4074371..4075237 (-) 867 WP_069182278.1 energy transducer TonB -
  NUW46_RS18845 (NUW46_18875) gshB 4075286..4076239 (-) 954 WP_083231733.1 glutathione synthase -
  NUW46_RS18850 (NUW46_18880) pilG 4076537..4076929 (+) 393 WP_008175635.1 twitching motility response regulator PilG Regulator
  NUW46_RS18855 (NUW46_18885) pilH 4076962..4077324 (+) 363 WP_008939836.1 twitching motility response regulator PilH -
  NUW46_RS18860 (NUW46_18890) - 4077345..4077890 (+) 546 WP_069182279.1 chemotaxis protein CheW -
  NUW46_RS18865 (NUW46_18895) - 4077982..4080057 (+) 2076 WP_069182280.1 methyl-accepting chemotaxis protein -
  NUW46_RS18870 (NUW46_18900) - 4080085..4080984 (+) 900 WP_069182281.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14595.86 Da        Isoelectric Point: 5.2241

>NTDB_id=721261 NUW46_RS18850 WP_008175635.1 4076537..4076929(+) (pilG) [Marinobacter sp. MA]
MDDNFENLKIMVIDDSKTIRRTAETLLKKVGCEVITATDGFDALAKIADSQPDIIFVDIMMPRLDGYQTCALIKNNSSFK
KTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKDELLNTIRQYVPQAEQ

Nucleotide


Download         Length: 393 bp        

>NTDB_id=721261 NUW46_RS18850 WP_008175635.1 4076537..4076929(+) (pilG) [Marinobacter sp. MA]
ATGGATGACAACTTCGAGAATTTGAAGATCATGGTGATCGACGACAGTAAAACCATACGTCGCACCGCAGAAACCCTTCT
GAAAAAGGTCGGCTGTGAGGTCATCACCGCGACTGACGGCTTTGACGCTCTTGCAAAGATTGCCGATTCCCAGCCGGACA
TCATTTTTGTCGATATCATGATGCCCCGCCTGGACGGCTACCAGACCTGCGCACTTATCAAGAACAATTCCTCCTTCAAA
AAGACGCCGGTTATCATGCTCTCCAGCAAGGACGGGCTGTTCGACAAGGCCAAGGGCCGGATCGTCGGCTCGGACCAGTA
TCTGACCAAGCCGTTCAGTAAGGATGAGCTACTCAATACCATCCGCCAGTATGTTCCACAGGCGGAACAGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G6YWX8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.4

96.154

0.754
  vicR Streptococcus mutans UA159

41.803

93.846

0.392
  micA Streptococcus pneumoniae Cp1015

44.037

83.846

0.369
  pilH Synechocystis sp. PCC 6803

40.517

89.231

0.362