Detailed information NTG0071865

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: EL271_RS04575
• Genome accession: NZ_AP018937
• Coordinates: 848245..849198 (+)
• Length: 317 a.a.
• NCBI ID: WP_000495909.1
• Uniprot ID: A0A0H2UPP6
• Organism: Streptococcus pneumoniae strain HU-OH
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 843245..854198

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL271_RS04550	rpmG	843988..844137 (+)	150	WP_001809104.1	50S ribosomal protein L33	-
EL271_RS04555 (SPOH_0839)	secG	844177..844410 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
EL271_RS04560 (SPOH_0840)	rnr	844512..846866 (+)	2355	WP_126418321.1	ribonuclease R	-
EL271_RS04565 (SPOH_0841)	smpB	846829..847296 (+)	468	WP_001051753.1	SsrA-binding protein SmpB	-
EL271_RS04570 (SPOH_0842)	tehB	847312..848172 (+)	861	WP_000413769.1	SAM-dependent methyltransferase TehB	-
EL271_RS04575 (SPOH_0843)	coiA	848245..849198 (+)	954	WP_000495909.1	competence protein CoiA	Machinery gene
EL271_RS04580 (SPOH_0844)	pepF	849217..851019 (+)	1803	WP_000244134.1	oligoendopeptidase F	Regulator
EL271_RS04585 (SPOH_0845)	-	851021..851734 (+)	714	WP_000230399.1	O-methyltransferase	-
EL271_RS04590 (SPOH_0846)	prsA	851801..852742 (+)	942	WP_000727935.1	peptidylprolyl isomerase PrsA	-
EL271_RS04595 (SPOH_0847)	-	852861..853202 (-)	342	Protein_857	transposase	-
EL271_RS04605	-	853615..853710 (+)	96	Protein_858	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38243.86 Da
• Isoelectric Point: 8.9865

>NTDB_id=71865 EL271_RS04575 WP_000495909.1 848245..849198(+) (coiA) [Streptococcus pneumoniae strain HU-OH]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=71865 EL271_RS04575 WP_000495909.1 848245..849198(+) (coiA) [Streptococcus pneumoniae strain HU-OH]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGCTCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGCACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-263)

3D structure

• AlphaFold DB: A0A0H2UPP6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	100	100	1
coiA	Streptococcus pneumoniae Rx1	99.369	100	0.994
coiA	Streptococcus pneumoniae D39	99.369	100	0.994
coiA	Streptococcus pneumoniae R6	99.369	100	0.994
coiA	Streptococcus mitis NCTC 12261	89.274	100	0.893
coiA	Lactococcus lactis subsp. cremoris KW2	42.593	100	0.435