Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   K6K39_RS19125 Genome accession   NZ_AP024135
Coordinates   4289786..4290910 (-) Length   374 a.a.
NCBI ID   WP_059251644.1    Uniprot ID   A0ABP5NLL6
Organism   Streptomyces sp. EAS-AB2608 strain NBRC 114648     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4284786..4295910
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K6K39_RS19100 (EASAB2608_03914) cseB 4285492..4286196 (-) 705 WP_059251637.1 two-component system response regulator CseB -
  K6K39_RS19105 (EASAB2608_03915) - 4286263..4286859 (-) 597 WP_059251638.1 hypothetical protein -
  K6K39_RS19110 (EASAB2608_03916) - 4286901..4287440 (-) 540 WP_055703482.1 SigE family RNA polymerase sigma factor -
  K6K39_RS19115 (EASAB2608_03917) - 4287716..4288591 (-) 876 WP_059251641.1 A/G-specific adenine glycosylase -
  K6K39_RS19120 (EASAB2608_03918) - 4288771..4289598 (+) 828 WP_208639868.1 hypothetical protein -
  K6K39_RS19125 (EASAB2608_03919) disA 4289786..4290910 (-) 1125 WP_059251644.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  K6K39_RS19130 (EASAB2608_03920) radA/sms 4290991..4292400 (-) 1410 WP_059251646.1 DNA repair protein RadA Machinery gene
  K6K39_RS19135 (EASAB2608_03921) - 4292620..4294524 (+) 1905 WP_221334656.1 BACON domain-containing protein -
  K6K39_RS19140 (EASAB2608_03922) - 4295056..4295889 (-) 834 WP_059251650.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 39940.64 Da        Isoelectric Point: 4.9201

>NTDB_id=71601 K6K39_RS19125 WP_059251644.1 4289786..4290910(-) (disA) [Streptomyces sp. EAS-AB2608 strain NBRC 114648]
MAANDRAAAPGKSGGSAGSDGLMRASLSAVAPGTALRDGLERVLRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLEELIA
GVEPDRELVVRDYVPEPTAKRSRTVDEALAELDALTHAELLELGTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=71601 K6K39_RS19125 WP_059251644.1 4289786..4290910(-) (disA) [Streptomyces sp. EAS-AB2608 strain NBRC 114648]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGTGCCGGTTCCGATGGCCTGATGCGCGCCTCGCT
GAGCGCCGTGGCTCCCGGTACGGCCCTGCGTGACGGCCTGGAGCGGGTCCTGCGCGGCAACACCGGCGGGCTCATCGTGC
TCGGCTCCGACAAGACGGTCGAGGCGATGTGCACGGGCGGTTTCGTGCTGGACGTCGAGTTCACCGCCACCCGGCTGCGG
GAGCTGTGCAAGCTGGACGGCGGCATCGTGCTGTCGTCGGACCTGTCGAAGATCCTGCGCGCGGGCGTCCAGCTGGTCCC
GGACCCGACGATCCCCACGGAGGAGACGGGCACCCGGCACCGCACGGCGGACCGGGTGAGCAAGCAGGTCGGCTTCCCGG
TGGTCTCGGTCTCCCAGTCGATGCGGCTGATCGCCCTGTACGTGGACGGTCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGCGCGAACCAGGCGCTGGCGACCCTGGAGCGGTACAAGCTCCGGCTGGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGTCGGCGGTCGCGCAGCGGCTGGAGATGGTCCGCCGCATCG
CCACCGAGATCGCCGAGTACGTGGTCGAGCTGGGCACGGACGGCCGGCTTCTCGCACTTCAGCTGGAGGAGTTGATCGCC
GGGGTCGAGCCCGACCGCGAGCTGGTGGTCCGGGACTACGTCCCCGAGCCGACGGCGAAGCGGTCCCGCACGGTCGACGA
GGCGCTGGCCGAGCTGGACGCCCTGACCCACGCGGAACTTCTCGAACTGGGCACGGTGGCGCGGGCGCTGGGCTACACCG
GGTCCCCCGAGACGCTCGACTCCGCGGTGTCGCCGCGCGGCTTCCGCCTCCTGGCCAAGGTGCCGCGGCTGCCGGGCGCC
ATCATCGACCGGCTGGTGGAGCACTTCGGGGGGCTGCAGAAGCTGCTCGCCGCGAGCGTGGACGACCTGCAGACCGTCGA
CGGCGTGGGCGAGGCCCGGGCGAGGAGCGTACGGGAGGGGCTGTCGCGCCTGGCCGAGTCCTCCATCCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.532

92.513

0.43


Multiple sequence alignment