Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | URS_RS06100 | Genome accession | NZ_AP018824 |
| Coordinates | 1262156..1262719 (+) | Length | 187 a.a. |
| NCBI ID | WP_004991990.1 | Uniprot ID | A0A2N6VGP2 |
| Organism | Acinetobacter ursingii strain M3 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1257156..1267719
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| URS_RS06070 (URS_1246) | - | 1257356..1257730 (-) | 375 | WP_004992014.1 | hypothetical protein | - |
| URS_RS06075 (URS_1247) | - | 1257937..1258281 (+) | 345 | WP_004992011.1 | GlpM family protein | - |
| URS_RS06080 (URS_1248) | - | 1258302..1258586 (+) | 285 | WP_004992008.1 | YciI family protein | - |
| URS_RS06085 (URS_1249) | tenA | 1258651..1259322 (-) | 672 | WP_004992006.1 | thiaminase II | - |
| URS_RS06090 (URS_1250) | - | 1259517..1260596 (+) | 1080 | WP_004992003.1 | DUF475 domain-containing protein | - |
| URS_RS06095 (URS_1251) | - | 1260740..1262104 (+) | 1365 | WP_010588969.1 | MFS transporter | - |
| URS_RS06100 (URS_1252) | ssb | 1262156..1262719 (+) | 564 | WP_004991990.1 | single-stranded DNA-binding protein | Machinery gene |
| URS_RS06105 (URS_1253) | - | 1263410..1264105 (-) | 696 | WP_010588970.1 | TetR/AcrR family transcriptional regulator | - |
| URS_RS06110 (URS_1254) | - | 1264356..1265192 (+) | 837 | WP_004991982.1 | fumarylacetoacetate hydrolase family protein | - |
| URS_RS06115 (URS_1255) | - | 1265254..1266216 (+) | 963 | WP_119686841.1 | VOC family protein | - |
Sequence
Protein
Download Length: 187 a.a. Molecular weight: 20541.27 Da Isoelectric Point: 6.4820
>NTDB_id=71572 URS_RS06100 WP_004991990.1 1262156..1262719(+) (ssb) [Acinetobacter ursingii strain M3]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKNTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDSRQQGDQAMGGGNDFNQPRFNNAPQQSGYGQNNGSNQGNYANNSSGGYGNA
GNNNPGGFAPKAPAAPAPSDLDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKNTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDSRQQGDQAMGGGNDFNQPRFNNAPQQSGYGQNNGSNQGNYANNSSGGYGNA
GNNNPGGFAPKAPAAPAPSDLDDDLPF
Nucleotide
Download Length: 564 bp
>NTDB_id=71572 URS_RS06100 WP_004991990.1 1262156..1262719(+) (ssb) [Acinetobacter ursingii strain M3]
ATGCGTGGTGTGAATAAAGTTATTTTAGTTGGTACTTTAGGACGTGATCCAGAAACCAAAACTTTTCCAAATGGAGGTTC
ACTGACTCAGTTTTCAATTGCGACCAGTGAATCTTGGACAGATAAAAATACAGGTGAGCGTAAAGAGCAAACCGAATGGC
ATCGTATTGTCTTGCATAATCGTTTAGGGGAAATTGCACAGCAATATTTGCGTAAAGGATCAAAAGTTTATATTGAAGGT
TCTTTGCGTACTCGCCAGTGGACGGACCAAAACGGACAGGAACGCTATACCACTGAAATTCGTGGTGAGCAAATGCAGAT
GTTGGATTCTCGTCAGCAAGGGGATCAGGCAATGGGCGGTGGCAATGATTTTAATCAGCCACGTTTTAATAATGCTCCAC
AACAGTCTGGCTATGGTCAAAATAATGGCTCTAATCAGGGTAACTATGCCAATAATTCTTCTGGCGGTTATGGCAATGCG
GGCAACAATAATCCAGGCGGTTTTGCGCCAAAAGCACCTGCTGCACCAGCGCCTTCTGATTTGGATGATGATTTACCGTT
CTAG
ATGCGTGGTGTGAATAAAGTTATTTTAGTTGGTACTTTAGGACGTGATCCAGAAACCAAAACTTTTCCAAATGGAGGTTC
ACTGACTCAGTTTTCAATTGCGACCAGTGAATCTTGGACAGATAAAAATACAGGTGAGCGTAAAGAGCAAACCGAATGGC
ATCGTATTGTCTTGCATAATCGTTTAGGGGAAATTGCACAGCAATATTTGCGTAAAGGATCAAAAGTTTATATTGAAGGT
TCTTTGCGTACTCGCCAGTGGACGGACCAAAACGGACAGGAACGCTATACCACTGAAATTCGTGGTGAGCAAATGCAGAT
GTTGGATTCTCGTCAGCAAGGGGATCAGGCAATGGGCGGTGGCAATGATTTTAATCAGCCACGTTTTAATAATGCTCCAC
AACAGTCTGGCTATGGTCAAAATAATGGCTCTAATCAGGGTAACTATGCCAATAATTCTTCTGGCGGTTATGGCAATGCG
GGCAACAATAATCCAGGCGGTTTTGCGCCAAAAGCACCTGCTGCACCAGCGCCTTCTGATTTGGATGATGATTTACCGTT
CTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
55.08 |
100 |
0.551 |
| ssb | Vibrio cholerae strain A1552 |
45.596 |
100 |
0.471 |
| ssb | Neisseria meningitidis MC58 |
39.572 |
100 |
0.396 |
| ssb | Neisseria gonorrhoeae MS11 |
39.572 |
100 |
0.396 |