Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   M0P24_RS07945 Genome accession   NZ_CP116957
Coordinates   1579103..1579753 (+) Length   216 a.a.
NCBI ID   WP_013851566.1    Uniprot ID   F5X588
Organism   Streptococcus pasteurianus strain WUSP070     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1574103..1584753
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0P24_RS07920 (M0P24_07920) - 1575650..1576696 (-) 1047 WP_013851569.1 hypothetical protein -
  M0P24_RS07925 (M0P24_07925) - 1576711..1577091 (-) 381 WP_003063685.1 rhodanese-like domain-containing protein -
  M0P24_RS07930 (M0P24_07930) - 1577102..1578070 (-) 969 WP_013851568.1 ROK family glucokinase -
  M0P24_RS07935 (M0P24_07935) - 1578063..1578272 (-) 210 WP_012961615.1 YqgQ family protein -
  M0P24_RS07940 (M0P24_07940) - 1578443..1578973 (-) 531 WP_013851567.1 Dps family protein -
  M0P24_RS07945 (M0P24_07945) cclA/cilC 1579103..1579753 (+) 651 WP_013851566.1 prepilin peptidase Machinery gene
  M0P24_RS07950 (M0P24_07950) - 1579836..1581176 (+) 1341 WP_003063674.1 Nramp family divalent metal transporter -
  M0P24_RS07955 (M0P24_07955) - 1581160..1582866 (-) 1707 WP_274501125.1 IS1182 family transposase -
  M0P24_RS07960 (M0P24_07960) - 1583067..1583336 (-) 270 Protein_1587 sodium transporter -
  M0P24_RS07965 (M0P24_07965) - 1583339..1583716 (+) 378 Protein_1588 conjugal transfer protein -
  M0P24_RS07970 (M0P24_07970) - 1583804..1584004 (+) 201 WP_003063668.1 helix-turn-helix transcriptional regulator -
  M0P24_RS07975 (M0P24_07975) - 1584021..1584245 (+) 225 Protein_1590 hypothetical protein -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 24815.77 Da        Isoelectric Point: 5.5386

>NTDB_id=715167 M0P24_RS07945 WP_013851566.1 1579103..1579753(+) (cclA/cilC) [Streptococcus pasteurianus strain WUSP070]
MDILLFFFLGASIASFLSLIVDRFPEKSIIFPASHCDSCGKQLAIRDLIPIFSQLINHSRCRFCHTKIPFWYGLLELYFG
VIVVLYYCALLSLDQVFILFFSTTLSLYDLKCQEFPLLVWLLPSIFLLFVTPINALAIILLAFGIMAELIDLKIGSGDFF
YLASLSLLLDVQTILWIIELGSLSGIIYYFFQTNKRIPFVPFLFLGYLILFIFNHD

Nucleotide


Download         Length: 651 bp        

>NTDB_id=715167 M0P24_RS07945 WP_013851566.1 1579103..1579753(+) (cclA/cilC) [Streptococcus pasteurianus strain WUSP070]
ATGGACATTTTATTATTCTTTTTTCTAGGGGCTTCTATTGCTTCTTTTCTCAGTTTAATCGTTGATCGATTTCCTGAAAA
ATCAATCATTTTTCCTGCCAGTCACTGTGATTCTTGTGGAAAACAACTTGCCATTCGTGATTTGATTCCTATTTTTTCTC
AACTGATAAATCATTCACGTTGTCGTTTTTGCCACACCAAAATTCCTTTCTGGTATGGACTGTTAGAACTTTATTTTGGG
GTCATTGTCGTACTTTACTATTGCGCACTTCTCTCACTCGACCAAGTTTTTATCTTGTTTTTTAGCACAACGCTTAGTCT
TTATGACTTGAAATGTCAAGAGTTTCCATTGTTGGTTTGGCTCCTTCCAAGTATTTTTTTGCTTTTTGTCACGCCGATTA
ATGCGCTAGCTATTATTCTTTTGGCTTTTGGGATAATGGCAGAGCTGATTGATTTGAAAATCGGTAGCGGTGATTTTTTC
TACCTTGCCAGTTTGAGTCTGCTTCTTGACGTTCAAACCATTTTATGGATTATCGAACTTGGCTCTCTTTCAGGTATTAT
TTACTACTTTTTCCAGACAAATAAACGAATTCCCTTTGTGCCATTTTTGTTTTTAGGATATCTGATTTTATTCATTTTTA
ACCATGATTAA

Domains

Predicted by InterProScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(9-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F5X588

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis SK321

46.117

95.37

0.44
  cclA/cilC Streptococcus pneumoniae Rx1

46.04

93.519

0.431
  cclA/cilC Streptococcus pneumoniae D39

46.04

93.519

0.431
  cclA/cilC Streptococcus pneumoniae R6

46.04

93.519

0.431
  cclA/cilC Streptococcus pneumoniae TIGR4

46.04

93.519

0.431
  cclA/cilC Streptococcus mitis NCTC 12261

45.05

93.519

0.421