Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   NQZ90_RS07990 Genome accession   NZ_CP102148
Coordinates   1632157..1632801 (+) Length   214 a.a.
NCBI ID   WP_024414003.1    Uniprot ID   A0A0Z8HFC9
Organism   Streptococcus suis strain DNC15     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1627157..1637801
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ90_RS07970 (NQZ90_07970) - 1628182..1629927 (-) 1746 WP_044667534.1 site-specific DNA-methyltransferase -
  NQZ90_RS07975 (NQZ90_07975) - 1630092..1630637 (-) 546 WP_024375860.1 class I SAM-dependent methyltransferase -
  NQZ90_RS07980 (NQZ90_07980) - 1630647..1631165 (-) 519 WP_024414005.1 TetR/AcrR family transcriptional regulator -
  NQZ90_RS07985 (NQZ90_07985) - 1631287..1632105 (+) 819 WP_024415241.1 cation diffusion facilitator family transporter -
  NQZ90_RS07990 (NQZ90_07990) cclA/cilC 1632157..1632801 (+) 645 WP_024414003.1 A24 family peptidase Machinery gene
  NQZ90_RS07995 (NQZ90_07995) - 1632909..1634369 (+) 1461 WP_014638479.1 nicotinate phosphoribosyltransferase -
  NQZ90_RS08000 (NQZ90_08000) nadE 1634382..1635206 (+) 825 WP_044679878.1 ammonia-dependent NAD(+) synthetase -
  NQZ90_RS08005 (NQZ90_08005) trpB 1635248..1636423 (-) 1176 WP_024414001.1 tryptophan synthase subunit beta -
  NQZ90_RS08010 (NQZ90_08010) - 1637242..1637769 (-) 528 WP_044672083.1 VanZ family protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24223.40 Da        Isoelectric Point: 8.4760

>NTDB_id=715017 NQZ90_RS07990 WP_024414003.1 1632157..1632801(+) (cclA/cilC) [Streptococcus suis strain DNC15]
MKTIILFFLGASIGSFLGLVIDRFPEQPIIAPSSHCNACKRRLKAWDLIPVLSQLSTKSKCRYCKAKIPYWYLGLEFLAG
LVVLLCHFQILNLTETILILAGLVLTIYDIKHQEYPFAVWLVFTFIALVLSQLNWLFCGFLLLAYLTEKWQINIGSGDFL
YLASLALICGFTELLWIIQISSLLGLLVFAIFKPKSIPYVPLLFLSSIPIILCI

Nucleotide


Download         Length: 645 bp        

>NTDB_id=715017 NQZ90_RS07990 WP_024414003.1 1632157..1632801(+) (cclA/cilC) [Streptococcus suis strain DNC15]
ATGAAGACAATTATCTTATTTTTCCTTGGAGCTTCTATCGGCTCCTTCCTGGGATTGGTCATCGACCGTTTCCCTGAACA
GCCCATTATCGCCCCCTCTAGTCACTGCAATGCCTGCAAGCGACGGCTCAAGGCCTGGGACTTAATTCCAGTCCTATCCC
AGCTTTCGACAAAATCCAAATGCCGTTACTGCAAGGCGAAGATACCTTATTGGTATCTGGGACTAGAATTCTTAGCTGGT
CTAGTTGTCCTGCTCTGCCATTTTCAAATCCTAAACCTGACCGAAACCATTCTCATCTTGGCAGGACTAGTTTTGACCAT
TTACGACATCAAACATCAGGAATATCCTTTTGCTGTCTGGCTTGTTTTTACTTTTATAGCTCTGGTACTCTCCCAGCTCA
ACTGGCTTTTCTGTGGCTTTTTGCTCTTGGCCTATCTGACTGAAAAATGGCAAATCAATATTGGTTCTGGTGACTTTCTC
TATCTGGCAAGTTTGGCCTTAATATGTGGATTTACAGAACTCCTCTGGATTATCCAGATTAGTTCCCTCCTAGGGCTTCT
TGTCTTCGCCATTTTCAAACCCAAGTCTATTCCCTACGTACCACTCCTTTTTCTTTCAAGTATTCCTATCATTCTGTGCA
TCTAA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(9-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0Z8HFC9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis SK321

49.057

99.065

0.486
  cclA/cilC Streptococcus pneumoniae Rx1

48.544

96.262

0.467
  cclA/cilC Streptococcus pneumoniae D39

48.544

96.262

0.467
  cclA/cilC Streptococcus pneumoniae R6

48.544

96.262

0.467
  cclA/cilC Streptococcus pneumoniae TIGR4

46.698

99.065

0.463
  cclA/cilC Streptococcus mitis NCTC 12261

45.283

99.065

0.449