Detailed information    

insolico Bioinformatically predicted

Overview

Name   ciaH   Type   Regulator
Locus tag   NQZ97_RS05345 Genome accession   NZ_CP102136
Coordinates   1084181..1085560 (+) Length   459 a.a.
NCBI ID   WP_257110697.1    Uniprot ID   -
Organism   Streptococcus suis strain M105052_S26     
Function   Required for optimal comC expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1079181..1090560
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ97_RS05315 (NQZ97_05315) pstA 1079623..1080510 (+) 888 WP_014635996.1 phosphate ABC transporter permease PstA -
  NQZ97_RS05320 (NQZ97_05320) pstB 1080535..1081338 (+) 804 WP_002940866.1 phosphate ABC transporter ATP-binding protein PstB -
  NQZ97_RS05325 (NQZ97_05325) pstB 1081350..1082108 (+) 759 WP_257110696.1 phosphate ABC transporter ATP-binding protein PstB -
  NQZ97_RS05330 (NQZ97_05330) phoU 1082137..1082793 (+) 657 WP_043033622.1 phosphate signaling complex protein PhoU -
  NQZ97_RS05335 (NQZ97_05335) - 1082984..1083322 (+) 339 WP_238142829.1 hypothetical protein -
  NQZ97_RS05340 (NQZ97_05340) ciaR 1083517..1084188 (+) 672 WP_014637852.1 response regulator transcription factor Regulator
  NQZ97_RS05345 (NQZ97_05345) ciaH 1084181..1085560 (+) 1380 WP_257110697.1 cell wall metabolism sensor histidine kinase WalK Regulator
  NQZ97_RS05350 (NQZ97_05350) - 1085661..1086890 (+) 1230 WP_105130789.1 transglutaminase domain-containing protein -
  NQZ97_RS05355 (NQZ97_05355) rpsT 1087106..1087354 (-) 249 WP_012027069.1 30S ribosomal protein S20 -
  NQZ97_RS05360 (NQZ97_05360) coaA 1087413..1088333 (-) 921 WP_002940857.1 type I pantothenate kinase -
  NQZ97_RS05365 (NQZ97_05365) - 1088442..1089032 (+) 591 WP_074411948.1 class I SAM-dependent methyltransferase -
  NQZ97_RS05370 (NQZ97_05370) - 1089029..1090306 (+) 1278 WP_024413752.1 pyrimidine-nucleoside phosphorylase -

Sequence

Protein


Download         Length: 459 a.a.        Molecular weight: 51902.60 Da        Isoelectric Point: 6.8979

>NTDB_id=714639 NQZ97_RS05345 WP_257110697.1 1084181..1085560(+) (ciaH) [Streptococcus suis strain M105052_S26]
MPKRIRKLVYTDKFSFFIRYFAVFTLIFGLMTAIIFQLMRSTMYQNSDNTLKRIKEEPAMAVGFAIARTYEPNSVFILQD
SPTSEETTSSSSDSMPVPKNQKNTRGVEQLKLGINTHVLLYSKSGEMVNPDTFTGLADLPLDKEKLGEIKEATVESSFGM
SEDYRYVTIELATDELGYYSSYDIKYATILVNVSQIKSSIETYESTVAIVMVSAWLISILASIYLSNFSIRPILISYQKQ
KDFVENASHELRTPLAVLQNRLESLFRHPEATILESSESIGSSLEEVRNMRLLTTNLLNLARRDDGLKVDMIDVQPNYFD
EIFANYLMIAEENGKTLTVNNLIHQPIRTDKVLIKQLLTILFDNAMKYTDDDGKIQITANIKDKSVYFTVADNGLGISDA
DKKKIFDRFYRVDKARTRQKGGFGLGLSLAQQIIKTLGGKISVRDNQPKGTIFEVGLPK

Nucleotide


Download         Length: 1380 bp        

>NTDB_id=714639 NQZ97_RS05345 WP_257110697.1 1084181..1085560(+) (ciaH) [Streptococcus suis strain M105052_S26]
ATGCCTAAGCGAATCAGAAAATTAGTGTATACGGATAAATTTTCCTTCTTTATCCGTTATTTTGCAGTATTTACCCTGAT
TTTTGGTTTGATGACAGCTATCATTTTTCAATTAATGCGTTCAACTATGTATCAAAATTCAGATAATACCTTGAAACGGA
TTAAGGAAGAGCCAGCGATGGCTGTTGGTTTTGCAATCGCAAGAACCTATGAGCCTAACTCTGTCTTTATACTTCAAGAT
AGCCCAACTAGTGAAGAAACGACGAGCTCTAGCTCAGATAGCATGCCTGTTCCTAAAAATCAAAAAAATACTAGAGGTGT
AGAACAGCTGAAATTAGGTATCAATACTCATGTCTTACTCTATAGTAAAAGTGGAGAAATGGTCAATCCGGATACTTTTA
CTGGTTTGGCCGACCTACCGTTAGATAAGGAAAAATTGGGCGAAATTAAGGAAGCAACGGTTGAATCAAGCTTCGGTATG
TCTGAAGATTATCGCTATGTGACGATTGAGCTGGCTACAGATGAACTAGGTTATTATTCGTCCTATGATATAAAATATGC
GACAATTTTAGTGAATGTCAGCCAAATAAAATCTTCCATTGAGACCTATGAATCGACAGTTGCTATTGTTATGGTATCAG
CTTGGCTCATTTCTATCTTGGCCAGCATTTACCTATCAAATTTTAGCATACGTCCAATTCTAATTAGCTATCAAAAGCAA
AAAGACTTTGTTGAAAATGCTAGTCATGAGTTGCGTACGCCGTTGGCAGTGCTCCAAAATCGCTTGGAGAGCCTATTTCG
CCATCCCGAAGCGACGATTTTAGAGAGTAGTGAAAGCATCGGATCTAGTTTGGAAGAAGTCCGAAATATGCGATTATTGA
CAACGAACCTGCTCAATTTGGCTCGTCGTGATGATGGCTTAAAAGTCGATATGATCGATGTCCAACCGAACTATTTTGAT
GAAATCTTTGCTAATTACCTTATGATTGCTGAAGAAAATGGAAAAACGCTAACAGTTAATAATTTGATTCATCAGCCGAT
TCGAACAGACAAGGTCCTGATTAAACAGTTGCTTACCATTTTATTTGACAATGCCATGAAGTATACCGATGATGATGGCA
AAATTCAAATTACAGCTAATATCAAGGATAAATCTGTCTACTTTACAGTTGCCGACAATGGTTTGGGAATCAGCGATGCC
GATAAGAAGAAAATCTTTGATCGCTTTTATCGAGTTGATAAGGCCAGAACGCGTCAAAAAGGTGGTTTCGGTCTAGGATT
ATCGCTGGCTCAGCAAATTATTAAGACACTAGGTGGGAAAATCTCTGTTAGAGATAACCAACCGAAAGGAACTATTTTTG
AGGTAGGATTACCTAAATAA

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(240-306)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(350-458)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ciaH Streptococcus mutans UA159

49.89

99.129

0.495
  ciaH Streptococcus pneumoniae Rx1

49.563

99.782

0.495
  ciaH Streptococcus pneumoniae D39

49.563

99.782

0.495
  ciaH Streptococcus pneumoniae R6

49.563

99.782

0.495
  ciaH Streptococcus pneumoniae TIGR4

49.563

99.782

0.495