Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   NQZ97_RS02940 Genome accession   NZ_CP102136
Coordinates   606067..606711 (-) Length   214 a.a.
NCBI ID   WP_029185181.1    Uniprot ID   A0A7T1P760
Organism   Streptococcus suis strain M105052_S26     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 601067..611711
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ97_RS02920 (NQZ97_02920) - 601296..601817 (+) 522 WP_043026528.1 VanZ family protein -
  NQZ97_RS02925 (NQZ97_02925) trpB 602444..603619 (+) 1176 WP_043026526.1 tryptophan synthase subunit beta -
  NQZ97_RS02930 (NQZ97_02930) nadE 603662..604486 (-) 825 WP_257110666.1 ammonia-dependent NAD(+) synthetase -
  NQZ97_RS02935 (NQZ97_02935) - 604499..605959 (-) 1461 WP_100664908.1 nicotinate phosphoribosyltransferase -
  NQZ97_RS02940 (NQZ97_02940) cclA/cilC 606067..606711 (-) 645 WP_029185181.1 A24 family peptidase Machinery gene
  NQZ97_RS02945 (NQZ97_02945) - 606763..607581 (-) 819 WP_044676963.1 cation diffusion facilitator family transporter -
  NQZ97_RS02950 (NQZ97_02950) - 607703..608221 (+) 519 WP_002942861.1 TetR/AcrR family transcriptional regulator -
  NQZ97_RS02955 (NQZ97_02955) - 608231..608785 (+) 555 WP_002942863.1 class I SAM-dependent methyltransferase -
  NQZ97_RS02960 (NQZ97_02960) - 608801..609580 (-) 780 WP_257110667.1 ABC transporter ATP-binding protein -
  NQZ97_RS02965 (NQZ97_02965) - 609898..611061 (-) 1164 WP_257110469.1 IS30 family transposase -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24197.36 Da        Isoelectric Point: 8.4760

>NTDB_id=714625 NQZ97_RS02940 WP_029185181.1 606067..606711(-) (cclA/cilC) [Streptococcus suis strain M105052_S26]
MKTIILFFLGASIGSFLGLVIDRFPEQSIIAPASHCNACKRRLKAWDLIPVLSQLSTKSKCRYCKAKIPYWYLGLEFLAG
LVVLLCHFQVLNLTETILILAGLVLTIYDIKHQEYPFAVWLIFTFIALVLSQLNWLFCGFLLLAYLTEKWQINIGSGDFL
YLASLALICGFTELLWIIQISSLLGLLVFAIFKPKSIPYVPLLFLSSIPIILCI

Nucleotide


Download         Length: 645 bp        

>NTDB_id=714625 NQZ97_RS02940 WP_029185181.1 606067..606711(-) (cclA/cilC) [Streptococcus suis strain M105052_S26]
ATGAAGACAATTATCCTATTTTTCCTTGGAGCTTCTATCGGCTCCTTCCTGGGATTGGTCATCGACCGTTTCCCTGAACA
GTCCATTATCGCCCCAGCTAGTCACTGCAATGCTTGCAAACGACGGCTCAAGGCCTGGGACTTAATTCCAGTCCTATCCC
AGCTTTCGACAAAATCCAAATGCCGTTACTGCAAGGCGAAGATACCTTATTGGTATCTGGGACTAGAATTCTTAGCTGGT
CTAGTTGTCCTGCTCTGCCATTTTCAAGTCCTAAACCTAACCGAAACCATTCTCATCTTGGCAGGACTAGTTTTGACCAT
TTACGACATCAAACATCAGGAATATCCTTTTGCTGTCTGGCTCATTTTTACTTTTATAGCTCTGGTGCTCTCCCAGCTCA
ACTGGCTTTTCTGTGGCTTTTTACTCTTGGCCTATCTGACTGAAAAATGGCAAATCAATATTGGTTCTGGTGACTTTCTC
TATCTGGCAAGTTTGGCCTTAATATGTGGATTTACAGAACTCCTCTGGATTATCCAGATTAGTTCCCTCCTAGGGCTTCT
TGTCTTCGCCATTTTCAAACCCAAGTCTATTCCCTACGTACCACTCCTTTTTCTTTCAAGTATTCCTATCATTCTGTGCA
TCTAA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(9-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T1P760

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis SK321

50

99.065

0.495
  cclA/cilC Streptococcus pneumoniae Rx1

49.515

96.262

0.477
  cclA/cilC Streptococcus pneumoniae D39

49.515

96.262

0.477
  cclA/cilC Streptococcus pneumoniae R6

49.515

96.262

0.477
  cclA/cilC Streptococcus pneumoniae TIGR4

47.642

99.065

0.472
  cclA/cilC Streptococcus mitis NCTC 12261

46.226

99.065

0.458