Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | NQZ97_RS00875 | Genome accession | NZ_CP102136 |
| Coordinates | 144070..145023 (+) | Length | 317 a.a. |
| NCBI ID | WP_256787745.1 | Uniprot ID | - |
| Organism | Streptococcus suis strain M105052_S26 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 139070..150023
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NQZ97_RS00835 (NQZ97_00835) | - | 139198..140166 (-) | 969 | WP_105152396.1 | S66 peptidase family protein | - |
| NQZ97_RS00840 (NQZ97_00840) | comYA | 140252..141202 (+) | 951 | WP_043026808.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| NQZ97_RS00845 (NQZ97_00845) | comYB | 141114..142151 (+) | 1038 | WP_249338910.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| NQZ97_RS00850 (NQZ97_00850) | comYC | 142153..142434 (+) | 282 | WP_043026803.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NQZ97_RS00855 (NQZ97_00855) | comGD | 142415..142822 (+) | 408 | WP_105152395.1 | competence type IV pilus minor pilin ComGD | - |
| NQZ97_RS00860 (NQZ97_00860) | comYE | 142794..143087 (+) | 294 | WP_043026799.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| NQZ97_RS00865 (NQZ97_00865) | comGF/cglF | 143074..143508 (+) | 435 | WP_043026797.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| NQZ97_RS00870 (NQZ97_00870) | comGG | 143486..144013 (+) | 528 | WP_043026795.1 | competence type IV pilus minor pilin ComGG | - |
| NQZ97_RS00875 (NQZ97_00875) | comYH | 144070..145023 (+) | 954 | WP_256787745.1 | class I SAM-dependent methyltransferase | Machinery gene |
| NQZ97_RS00880 (NQZ97_00880) | - | 145074..146261 (+) | 1188 | WP_099871820.1 | acetate kinase | - |
| NQZ97_RS00885 (NQZ97_00885) | - | 146578..147129 (+) | 552 | WP_256787742.1 | folate family ECF transporter S component | - |
| NQZ97_RS00890 (NQZ97_00890) | - | 147183..148439 (+) | 1257 | WP_256787741.1 | folylpolyglutamate synthase/dihydrofolate synthase family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35706.72 Da Isoelectric Point: 4.3462
>NTDB_id=714616 NQZ97_RS00875 WP_256787745.1 144070..145023(+) (comYH) [Streptococcus suis strain M105052_S26]
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVADQHETDLVVNNNQTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKDLDYLGIEVDDLLIDLSASMADVMQAE
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKAGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQNFMLNFKNWKQENAI
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVADQHETDLVVNNNQTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKDLDYLGIEVDDLLIDLSASMADVMQAE
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKAGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQNFMLNFKNWKQENAI
Nucleotide
Download Length: 954 bp
>NTDB_id=714616 NQZ97_RS00875 WP_256787745.1 144070..145023(+) (comYH) [Streptococcus suis strain M105052_S26]
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTGATCAGCATGAGACGGACCTTGTTGTCAATAACAATC
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTACCAATTCCTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTATAATCACCAGTTCACACCAGATTCCATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTAGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGTCAGAAAG
ACTTGGACTATCTTGGGATTGAAGTAGATGATCTCTTGATTGATTTATCAGCTAGCATGGCAGATGTTATGCAGGCAGAG
ATTTCTTTTGCCCAGGGCGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGTTATCAGGTCGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTCA
TGGAACAATCCCTCAAATATCTGGAAAAAGCTGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCTAATATTGTTGCTATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTGCAAA
GTCTTCAAGAACCAGAAGCTATTCAGAACTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTGATCAGCATGAGACGGACCTTGTTGTCAATAACAATC
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTACCAATTCCTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTATAATCACCAGTTCACACCAGATTCCATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTAGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGTCAGAAAG
ACTTGGACTATCTTGGGATTGAAGTAGATGATCTCTTGATTGATTTATCAGCTAGCATGGCAGATGTTATGCAGGCAGAG
ATTTCTTTTGCCCAGGGCGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGTTATCAGGTCGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTCA
TGGAACAATCCCTCAAATATCTGGAAAAAGCTGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCTAATATTGTTGCTATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTGCAAA
GTCTTCAAGAACCAGAAGCTATTCAGAACTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
60.127 |
99.685 |
0.599 |
| comYH | Streptococcus mutans UA159 |
59.81 |
99.685 |
0.596 |