Detailed information
Bioinformatically predicted
Overview
| Name | comB | Type | Regulator |
| Locus tag | NPS16_RS10135 | Genome accession | NZ_CP101986 |
| Coordinates | 1839128..1839280 (+) | Length | 50 a.a. |
| NCBI ID | WP_372552041.1 | Uniprot ID | - |
| Organism | Streptococcus mutans strain COCC33-14 | ||
| Function | transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1834128..1844280
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NPS16_RS08660 (NPS16_08660) | - | 1834160..1834324 (-) | 165 | WP_002273566.1 | class IIb bacteriocin, lactobin A/cerein 7B family | - |
| NPS16_RS08665 (NPS16_08665) | - | 1834364..1834567 (-) | 204 | WP_258968989.1 | ComC/BlpC family leader-containing pheromone/bacteriocin | - |
| NPS16_RS08670 (NPS16_08670) | - | 1834868..1835053 (-) | 186 | WP_002263346.1 | ComC/BlpC family leader-containing pheromone/bacteriocin | - |
| NPS16_RS08675 (NPS16_08675) | - | 1835191..1835352 (-) | 162 | WP_002263734.1 | Blp family class II bacteriocin | - |
| NPS16_RS08680 (NPS16_08680) | - | 1835397..1835651 (-) | 255 | WP_002267515.1 | Blp family class II bacteriocin | - |
| NPS16_RS08685 (NPS16_08685) | - | 1836039..1838253 (+) | 2215 | Protein_1669 | peptide cleavage/export ABC transporter | - |
| NPS16_RS08690 (NPS16_08690) | comB | 1838266..1839138 (+) | 873 | WP_374684427.1 | HlyD family efflux transporter periplasmic adaptor subunit | Regulator |
| NPS16_RS10135 | comB | 1839128..1839280 (+) | 153 | WP_372552041.1 | hypothetical protein | Regulator |
| NPS16_RS08695 (NPS16_08695) | - | 1839541..1839684 (-) | 144 | WP_002263740.1 | hypothetical protein | - |
| NPS16_RS08700 (NPS16_08700) | - | 1839976..1840998 (-) | 1023 | WP_258968990.1 | thioredoxin family protein | - |
| NPS16_RS08705 (NPS16_08705) | - | 1841483..1841671 (-) | 189 | WP_002270918.1 | Blp family class II bacteriocin | - |
| NPS16_RS08710 (NPS16_08710) | - | 1841835..1842047 (-) | 213 | WP_002264173.1 | Blp family class II bacteriocin | - |
| NPS16_RS08715 (NPS16_08715) | comC/blpC | 1842312..1842452 (+) | 141 | WP_002270250.1 | ComC/BlpC family leader-containing pheromone/bacteriocin | Regulator |
| NPS16_RS08720 (NPS16_08720) | comD/blpH | 1842594..1843919 (-) | 1326 | WP_002267940.1 | sensor histidine kinase | Regulator |
Sequence
Protein
Download Length: 50 a.a. Molecular weight: 5878.96 Da Isoelectric Point: 10.6821
>NTDB_id=713695 NPS16_RS10135 WP_372552041.1 1839128..1839280(+) (comB) [Streptococcus mutans strain COCC33-14]
MFFKVTAKAKVSKKDSQTIKYGLQGKTITVVEKKTFFDYYKDKLLNKNQK
MFFKVTAKAKVSKKDSQTIKYGLQGKTITVVEKKTFFDYYKDKLLNKNQK
Nucleotide
Download Length: 153 bp
>NTDB_id=713695 NPS16_RS10135 WP_372552041.1 1839128..1839280(+) (comB) [Streptococcus mutans strain COCC33-14]
ATGTTTTTTAAAGTGACAGCTAAAGCAAAAGTTTCTAAAAAAGACAGCCAAACCATTAAATACGGCCTCCAGGGTAAAAC
CATCACAGTTGTTGAAAAAAAGACTTTCTTTGATTATTATAAAGATAAACTGTTAAATAAAAATCAAAAATAA
ATGTTTTTTAAAGTGACAGCTAAAGCAAAAGTTTCTAAAAAAGACAGCCAAACCATTAAATACGGCCTCCAGGGTAAAAC
CATCACAGTTGTTGAAAAAAAGACTTTCTTTGATTATTATAAAGATAAACTGTTAAATAAAAATCAAAAATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB | Streptococcus mutans UA159 |
100 |
96 |
0.96 |
| comB/nlmE | Streptococcus mutans UA159 |
71.739 |
92 |
0.66 |
| comB | Streptococcus gordonii str. Challis substr. CH1 |
44.444 |
90 |
0.4 |