Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   NPS25_RS15475 Genome accession   NZ_CP101904
Coordinates   3145302..3146240 (-) Length   312 a.a.
NCBI ID   WP_269465507.1    Uniprot ID   -
Organism   Bacillus velezensis strain Ba-0321     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3140302..3151240
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NPS25_RS15440 (NPS25_15440) - 3140509..3140985 (+) 477 WP_007613428.1 Na+/H+ antiporter subunit E -
  NPS25_RS15445 (NPS25_15445) - 3140985..3141269 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  NPS25_RS15450 (NPS25_15450) mnhG 3141253..3141627 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  NPS25_RS15455 (NPS25_15455) - 3141667..3142050 (-) 384 WP_095352718.1 hotdog fold thioesterase -
  NPS25_RS15460 (NPS25_15460) comA 3142072..3142716 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  NPS25_RS15465 (NPS25_15465) comP 3142797..3145106 (-) 2310 WP_033574914.1 histidine kinase Regulator
  NPS25_RS15470 (NPS25_15470) comX 3145126..3145302 (-) 177 WP_007408675.1 competence pheromone ComX -
  NPS25_RS15475 (NPS25_15475) comQ 3145302..3146240 (-) 939 WP_269465507.1 class 1 isoprenoid biosynthesis enzyme Regulator
  NPS25_RS15480 (NPS25_15480) degQ 3146371..3146511 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  NPS25_RS15485 (NPS25_15485) - 3146977..3147318 (+) 342 WP_015418107.1 hypothetical protein -
  NPS25_RS15490 (NPS25_15490) - 3147325..3148548 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -
  NPS25_RS15495 (NPS25_15495) - 3148678..3150144 (-) 1467 WP_020954301.1 nicotinate phosphoribosyltransferase -
  NPS25_RS15500 (NPS25_15500) - 3150162..3150713 (-) 552 WP_003152033.1 cysteine hydrolase family protein -
  NPS25_RS15505 (NPS25_15505) - 3150810..3151208 (-) 399 WP_003152031.1 YueI family protein -

Sequence


Protein


Download         Length: 312 a.a.        Molecular weight: 35878.27 Da        Isoelectric Point: 6.1721

>NTDB_id=712603 NPS25_RS15475 WP_269465507.1 3145302..3146240(-) (comQ) [Bacillus velezensis strain Ba-0321]
MKTIIEQMCLDANQIKNKMKSIIEQNIFNQHLLQLLLGFVESRKYLTFAESALLHYEVFGGRDFKTAEKLAAGIEILTLS
ADIIDDLEDEDNKQALWMKIDRSEALSAAFSLYTAGLQGINSINMNPFILSYILKYTQDAMQGQHDDIINKPEKEDESLE
VIRLKCGSLFALSNVAGTMLATGKYNETVETYSYYKGMFEQIYSDYLALFSSKRSDILKDKHTLINLYLKRLFNEPSEKL
VRMFSHRETHLKFISDKNNFIQTLTDAGVTQYVSVLHQLYKQKCENAIEILNLETSKIDKLKKYVVNRGIEV

Nucleotide


Download         Length: 939 bp        

>NTDB_id=712603 NPS25_RS15475 WP_269465507.1 3145302..3146240(-) (comQ) [Bacillus velezensis strain Ba-0321]
GTGAAGACAATTATTGAGCAAATGTGTTTAGATGCCAACCAAATCAAGAATAAAATGAAGAGTATAATAGAGCAAAACAT
ATTTAATCAACATTTACTACAGCTTCTTCTTGGGTTTGTTGAATCCAGAAAATATTTAACCTTTGCTGAATCTGCTTTAT
TGCATTATGAAGTTTTTGGCGGAAGGGATTTTAAGACTGCTGAGAAACTTGCGGCGGGAATTGAAATTCTTACGCTTTCC
GCCGATATTATTGATGATCTTGAAGATGAAGATAACAAACAAGCTCTTTGGATGAAGATAGACCGTTCAGAAGCTTTAAG
CGCAGCTTTTTCATTATACACAGCAGGGCTGCAGGGGATTAATTCAATTAACATGAATCCTTTTATTCTTTCTTACATAC
TGAAATATACACAAGACGCTATGCAAGGACAACACGATGATATAATCAATAAGCCAGAGAAAGAAGATGAAAGTTTAGAG
GTCATTAGATTAAAATGCGGGAGTCTATTCGCTCTATCCAATGTGGCAGGTACTATGTTAGCAACTGGAAAGTATAATGA
AACTGTTGAAACGTATTCCTATTACAAAGGAATGTTTGAACAGATATATAGTGATTATCTGGCTCTTTTCAGCTCTAAAC
GCAGTGATATTTTAAAAGATAAACACACGTTAATCAACTTGTACCTTAAGAGGCTGTTTAACGAGCCTTCTGAAAAATTG
GTTCGTATGTTTTCTCATAGAGAAACACACCTTAAGTTTATATCTGATAAAAACAATTTTATTCAGACATTAACCGATGC
AGGTGTTACTCAGTATGTTTCAGTTTTACACCAATTGTATAAGCAAAAATGTGAAAATGCTATAGAGATACTAAATCTTG
AAACCAGTAAAATAGATAAATTGAAAAAATATGTAGTTAATAGGGGGATTGAAGTATAA

Domains


Predicted by InterproScan.

(53-247)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

62.456

91.346

0.571