Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   NPS25_RS15465 Genome accession   NZ_CP101904
Coordinates   3142797..3145106 (-) Length   769 a.a.
NCBI ID   WP_033574914.1    Uniprot ID   -
Organism   Bacillus velezensis strain Ba-0321     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3137797..3150106
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NPS25_RS15425 (NPS25_15425) - 3138257..3138688 (+) 432 WP_007408670.1 Na(+)/H(+) antiporter subunit B -
  NPS25_RS15430 (NPS25_15430) - 3138688..3139029 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  NPS25_RS15435 (NPS25_15435) - 3139022..3140503 (+) 1482 WP_007408671.1 Na+/H+ antiporter subunit D -
  NPS25_RS15440 (NPS25_15440) - 3140509..3140985 (+) 477 WP_007613428.1 Na+/H+ antiporter subunit E -
  NPS25_RS15445 (NPS25_15445) - 3140985..3141269 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  NPS25_RS15450 (NPS25_15450) mnhG 3141253..3141627 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  NPS25_RS15455 (NPS25_15455) - 3141667..3142050 (-) 384 WP_095352718.1 hotdog fold thioesterase -
  NPS25_RS15460 (NPS25_15460) comA 3142072..3142716 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  NPS25_RS15465 (NPS25_15465) comP 3142797..3145106 (-) 2310 WP_033574914.1 histidine kinase Regulator
  NPS25_RS15470 (NPS25_15470) comX 3145126..3145302 (-) 177 WP_007408675.1 competence pheromone ComX -
  NPS25_RS15475 (NPS25_15475) comQ 3145302..3146240 (-) 939 WP_269465507.1 class 1 isoprenoid biosynthesis enzyme Regulator
  NPS25_RS15480 (NPS25_15480) degQ 3146371..3146511 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  NPS25_RS15485 (NPS25_15485) - 3146977..3147318 (+) 342 WP_015418107.1 hypothetical protein -
  NPS25_RS15490 (NPS25_15490) - 3147325..3148548 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 769 a.a.        Molecular weight: 89153.57 Da        Isoelectric Point: 8.9349

>NTDB_id=712602 NPS25_RS15465 WP_033574914.1 3142797..3145106(-) (comP) [Bacillus velezensis strain Ba-0321]
MKNFIKQFTISVIILSLVYVCYVSYININGIIIGTKVIENKNKQFQVIEMSETTYGKFVGLEKGDIILKINKEKPSAKFL
KGDNLSHIKSLDVSRNGKQIHLDDFDIVNLDKSYSFFVFVLPLVFYFLSIVCIFYILKVNQTRKSFAGYILILFLLDISI
AYISAGGPFRGHSFNRYVNLFTFIASPIFYLQFIQQYFEELGKKFANRLINFLYIFPIFNIILEFFRKKLPFENIITNLN
LISFFLVTLSGFVLVFYHLYKYKYSEHAYILKVLILTNTLSFAPFLLFYVAPNILTGDYIFPALASASLLVLIPFGLVYQ
FVANKIFDIEFILGRMRYYTLLAVIPTLVIVGVLSVWAGTNALQMNPIRQTVFIFIVMFAVFYFKEIIDFKFRLKRFSEK
FNYQDSIFKYTQLIRSITSLKQMFKELKKTILDVLLVSKAYVFEVTSEGDILYHDKRDNEPDWEMYSKEFKKVTSEIGKI
IELNRGFLIKIGERGGSSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENVIQIEELMNHLQDLKQQGSNPVWLKKL
MFTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYD
LGLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDG
VGCNQEKGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKVDIEMEL

Nucleotide


Download         Length: 2310 bp        

>NTDB_id=712602 NPS25_RS15465 WP_033574914.1 3142797..3145106(-) (comP) [Bacillus velezensis strain Ba-0321]
GTGAAAAACTTTATTAAACAATTCACTATTTCAGTCATTATCTTAAGCCTCGTTTATGTTTGCTATGTTTCATATATAAA
CATAAATGGGATTATAATCGGGACAAAAGTTATTGAAAATAAAAACAAACAATTCCAAGTAATAGAGATGTCAGAAACTA
CTTACGGGAAATTCGTAGGTTTAGAAAAAGGTGACATCATTCTAAAAATCAACAAAGAAAAACCATCTGCTAAATTTTTA
AAAGGAGATAATCTTAGTCATATCAAAAGTTTAGATGTAAGCAGAAATGGAAAGCAAATTCATTTAGATGATTTTGATAT
TGTTAATTTAGACAAATCCTATAGCTTTTTTGTATTCGTTCTTCCACTTGTGTTTTATTTTTTAAGTATAGTATGTATAT
TTTACATTCTAAAGGTGAATCAAACAAGAAAATCGTTTGCGGGATACATTTTAATTTTGTTTTTGTTAGATATTTCAATT
GCTTATATAAGCGCAGGAGGACCATTTAGAGGACATTCATTTAACAGGTATGTCAATTTGTTCACATTTATAGCTTCTCC
TATATTTTATCTTCAGTTCATACAACAATATTTTGAGGAATTAGGAAAGAAGTTTGCAAATCGTCTAATCAATTTCTTAT
ATATATTTCCGATTTTTAATATTATTTTGGAATTTTTCCGTAAGAAATTACCTTTTGAAAACATTATAACAAACCTTAAT
CTTATCTCGTTTTTTCTCGTTACTCTTTCAGGTTTTGTTCTCGTGTTCTATCACTTATATAAGTATAAATATTCAGAGCA
TGCTTATATTTTGAAAGTTTTAATTCTGACAAATACACTTTCTTTTGCTCCATTTTTACTTTTTTACGTCGCACCTAATA
TTTTAACTGGTGATTATATATTTCCAGCACTGGCATCAGCCTCATTGCTTGTCCTTATCCCATTTGGATTAGTATATCAG
TTTGTTGCAAATAAAATATTTGATATAGAATTTATATTAGGAAGAATGAGGTATTATACTTTACTGGCTGTAATCCCAAC
GCTAGTTATTGTCGGAGTTTTATCGGTCTGGGCGGGAACAAATGCGCTTCAAATGAATCCTATTAGACAGACTGTTTTCA
TCTTTATCGTAATGTTTGCTGTATTTTACTTTAAAGAAATAATAGATTTTAAATTTCGGTTAAAACGTTTTTCTGAAAAA
TTTAATTATCAAGATAGTATATTCAAATATACTCAGCTTATCAGAAGCATAACATCTTTAAAACAAATGTTTAAAGAACT
AAAAAAGACGATTCTGGATGTTCTACTTGTCAGTAAAGCTTATGTCTTTGAAGTTACCTCTGAGGGTGACATTTTATATC
ATGATAAAAGGGATAATGAACCTGATTGGGAAATGTATTCAAAAGAATTTAAGAAGGTTACTTCAGAGATTGGAAAAATC
ATTGAGCTAAACCGCGGTTTCTTAATCAAGATAGGAGAACGCGGGGGAAGTTCTTATGTTTTGCTTTGTTTGTCCTCCAT
TAATACACCGAGACTGACACGGGATGAGATTTCATGGCTGAAAACATTGTCTTTCTATACGAGTGTCTCTATGGAAAACG
TGATACAGATCGAAGAACTCATGAACCATTTACAAGATCTAAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTG
ATGTTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTT
GAAGCGCCAGTGTGAGCTGTTTCTGGCAGATTTTAAGAAAGAAGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATC
AGATGAATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTGCGTCCTCAGCTGCTGTATGAT
TTGGGTCTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGG
CCGGTTTACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGA
AGCATTCACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGT
GTCGGCTGCAATCAGGAAAAAGGCGGCGGCCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCT
TGACGGACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGTAGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(569-638)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

75.357

100

0.756