Detailed information
Bioinformatically predicted
Overview
| Name | comX/sigX | Type | Regulator |
| Locus tag | NOV99_RS00435 | Genome accession | NZ_CP101844 |
| Coordinates | 75396..75662 (+) | Length | 88 a.a. |
| NCBI ID | WP_002939335.1 | Uniprot ID | A0A126UJ45 |
| Organism | Streptococcus suis strain 2018WUSS151 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 70396..80662
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NOV99_RS00405 (NOV99_00405) | recA | 71585..72736 (+) | 1152 | WP_011922545.1 | recombinase RecA | Machinery gene |
| NOV99_RS00410 (NOV99_00410) | spx | 72972..73370 (+) | 399 | WP_002939362.1 | transcriptional regulator Spx | - |
| NOV99_RS00415 (NOV99_00415) | - | 73470..73736 (+) | 267 | WP_002939360.1 | IreB family regulatory phosphoprotein | - |
| NOV99_RS00420 (NOV99_00420) | ruvX | 73736..74155 (+) | 420 | WP_002939356.1 | Holliday junction resolvase RuvX | - |
| NOV99_RS00425 (NOV99_00425) | - | 74167..74487 (+) | 321 | WP_002939343.1 | DUF1292 domain-containing protein | - |
| NOV99_RS00430 (NOV99_00430) | - | 74745..75323 (+) | 579 | WP_044667815.1 | nucleotidyltransferase family protein | - |
| NOV99_RS00435 (NOV99_00435) | comX/sigX | 75396..75662 (+) | 267 | WP_002939335.1 | hypothetical protein | Regulator |
| NOV99_RS00440 (NOV99_00440) | rpsJ | 75984..76292 (+) | 309 | WP_002939332.1 | 30S ribosomal protein S10 | - |
| NOV99_RS00445 (NOV99_00445) | rplC | 76505..77131 (+) | 627 | WP_011921686.1 | 50S ribosomal protein L3 | - |
| NOV99_RS00450 (NOV99_00450) | rplD | 77156..77779 (+) | 624 | WP_004195490.1 | 50S ribosomal protein L4 | - |
| NOV99_RS00455 (NOV99_00455) | - | 77779..78078 (+) | 300 | WP_004195491.1 | 50S ribosomal protein L23 | - |
| NOV99_RS00460 (NOV99_00460) | rplB | 78096..78929 (+) | 834 | WP_002936663.1 | 50S ribosomal protein L2 | - |
| NOV99_RS00465 (NOV99_00465) | rpsS | 79031..79312 (+) | 282 | WP_000533766.1 | 30S ribosomal protein S19 | - |
| NOV99_RS00470 (NOV99_00470) | rplV | 79330..79674 (+) | 345 | WP_002936662.1 | 50S ribosomal protein L22 | - |
| NOV99_RS00475 (NOV99_00475) | rpsC | 79687..80340 (+) | 654 | WP_002936661.1 | 30S ribosomal protein S3 | - |
Sequence
Protein
Download Length: 88 a.a. Molecular weight: 10717.52 Da Isoelectric Point: 9.1949
>NTDB_id=712297 NOV99_RS00435 WP_002939335.1 75396..75662(+) (comX/sigX) [Streptococcus suis strain 2018WUSS151]
MEFETVCLKVRNLGRLYCYFKVKFRNHIEAIIRKQESQKCKFDRLFHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
MEFETVCLKVRNLGRLYCYFKVKFRNHIEAIIRKQESQKCKFDRLFHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
Nucleotide
Download Length: 267 bp
>NTDB_id=712297 NOV99_RS00435 WP_002939335.1 75396..75662(+) (comX/sigX) [Streptococcus suis strain 2018WUSS151]
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAAACCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCTTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAAACCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCTTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comX/sigX | Streptococcus suis D9 |
73.973 |
82.955 |
0.614 |
| comX/sigX | Streptococcus suis isolate S10 |
72.603 |
82.955 |
0.602 |
| comX/sigX | Streptococcus suis P1/7 |
72.603 |
82.955 |
0.602 |
| comX/sigX/comX1/sigX1 | Streptococcus mitis NCTC 12261 |
39.506 |
92.045 |
0.364 |
| comX/sigX/comX2/sigX2 | Streptococcus mitis NCTC 12261 |
39.506 |
92.045 |
0.364 |