Detailed information
Bioinformatically predicted
Overview
| Name | degS | Type | Regulator |
| Locus tag | NPA43_RS15945 | Genome accession | NZ_CP101833 |
| Coordinates | 3108884..3110059 (-) | Length | 391 a.a. |
| NCBI ID | WP_099726394.1 | Uniprot ID | A0A2G8IWY9 |
| Organism | Bacillus pumilus strain NDY-10 | ||
| Function | phosphorylation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3103884..3115059
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NPA43_RS15910 (NPA43_15910) | - | 3104061..3104480 (-) | 420 | WP_099726390.1 | TIGR03826 family flagellar region protein | - |
| NPA43_RS15915 (NPA43_15915) | comFC | 3104537..3104893 (-) | 357 | WP_249705624.1 | ComF family protein | Machinery gene |
| NPA43_RS15920 (NPA43_15920) | - | 3105056..3105223 (-) | 168 | Protein_3083 | ComF family protein | - |
| NPA43_RS15925 (NPA43_15925) | - | 3105220..3105513 (-) | 294 | WP_099726391.1 | late competence development ComFB family protein | - |
| NPA43_RS15930 (NPA43_15930) | comFA | 3105578..3106951 (-) | 1374 | WP_142353656.1 | DEAD/DEAH box helicase | Machinery gene |
| NPA43_RS15935 (NPA43_15935) | - | 3107073..3107915 (-) | 843 | WP_099726393.1 | DegV family protein | - |
| NPA43_RS15940 (NPA43_15940) | degU | 3108130..3108819 (-) | 690 | WP_008348273.1 | two-component system response regulator DegU | Regulator |
| NPA43_RS15945 (NPA43_15945) | degS | 3108884..3110059 (-) | 1176 | WP_099726394.1 | sensor histidine kinase | Regulator |
| NPA43_RS15950 (NPA43_15950) | - | 3110281..3110949 (+) | 669 | WP_249705609.1 | YigZ family protein | - |
| NPA43_RS15955 (NPA43_15955) | - | 3110934..3112031 (+) | 1098 | WP_099726396.1 | LCP family protein | - |
| NPA43_RS15960 (NPA43_15960) | - | 3112067..3113134 (-) | 1068 | WP_099726397.1 | glycosyltransferase family 4 protein | - |
| NPA43_RS15965 (NPA43_15965) | - | 3113267..3114463 (-) | 1197 | WP_249705625.1 | glycosyltransferase | - |
Sequence
Protein
Download Length: 391 a.a. Molecular weight: 45527.26 Da Isoelectric Point: 5.8757
>NTDB_id=712257 NPA43_RS15945 WP_099726394.1 3108884..3110059(-) (degS) [Bacillus pumilus strain NDY-10]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLMIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFVMIRVPLTLQNKIVK
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLMIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFVMIRVPLTLQNKIVK
Nucleotide
Download Length: 1176 bp
>NTDB_id=712257 NPA43_RS15945 WP_099726394.1 3108884..3110059(-) (degS) [Bacillus pumilus strain NDY-10]
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGGATAGGCGAACAGTCCCGTCAACAATATGAGAGCCTAGTTGAAGAGCTTAAGCAAATCAAGCAGCAAG
TAAACGAGGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGCTTATCTGAAGTCAGCAGA
AACTTTAACAAATTCAGCGAAGAAGAAATACGAGAGGCCTACGAAAAAGCACATAATCTGCAAGTAGAACTCACCATGAT
CCAGCAGCGTGAGAAGCAGTTGAGAGAGAGAAGAGACGATTTAGAAAGACGATTATTAAGCTTACAGGACGTCATTGAAC
GCTCTGAAACGCTTGTGAGTCAAATTACGGTTGTTCTGAACTATCTCAACCAGGATTTACGCCAGGTAGGCGTTTTACTC
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCTCAAGAAGAAGAACGCAAAAGGGTATCTCGGGA
AATTCATGATGGTCCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCTGAATTAATTGAACGGATCTTTAGAGACCGTG
GTACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCTCTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACGCTAAGAAAATATTTAAACACAATCGAAGAATA
CGATGGGAAAACCAAGATTACGTTCCAATGCCTAGGCGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TATTTAGACTAGCCCAAGAAGCTGTCACAAATTCCTTAAAACATTCTGAAGCTGAAGAAATCTCTGTAAAGGTAGAAGTA
ACGAAAGACTTTGTGACATTAATGATCAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTTAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCGTTATGATTCGGGTGCCGTTAACATTGCAAAATAAAATTGTAAAATAG
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGGATAGGCGAACAGTCCCGTCAACAATATGAGAGCCTAGTTGAAGAGCTTAAGCAAATCAAGCAGCAAG
TAAACGAGGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGCTTATCTGAAGTCAGCAGA
AACTTTAACAAATTCAGCGAAGAAGAAATACGAGAGGCCTACGAAAAAGCACATAATCTGCAAGTAGAACTCACCATGAT
CCAGCAGCGTGAGAAGCAGTTGAGAGAGAGAAGAGACGATTTAGAAAGACGATTATTAAGCTTACAGGACGTCATTGAAC
GCTCTGAAACGCTTGTGAGTCAAATTACGGTTGTTCTGAACTATCTCAACCAGGATTTACGCCAGGTAGGCGTTTTACTC
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCTCAAGAAGAAGAACGCAAAAGGGTATCTCGGGA
AATTCATGATGGTCCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCTGAATTAATTGAACGGATCTTTAGAGACCGTG
GTACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCTCTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACGCTAAGAAAATATTTAAACACAATCGAAGAATA
CGATGGGAAAACCAAGATTACGTTCCAATGCCTAGGCGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TATTTAGACTAGCCCAAGAAGCTGTCACAAATTCCTTAAAACATTCTGAAGCTGAAGAAATCTCTGTAAAGGTAGAAGTA
ACGAAAGACTTTGTGACATTAATGATCAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTTAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCGTTATGATTCGGGTGCCGTTAACATTGCAAAATAAAATTGTAAAATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| degS | Bacillus subtilis subsp. subtilis str. 168 |
85.455 |
98.465 |
0.841 |