Detailed information NTG0711792

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: NPA28_RS17995
• Genome accession: NZ_CP101718
• Coordinates: 3544235..3545392 (-)
• Length: 385 a.a.
• NCBI ID: WP_044159475.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain S-5
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3539235..3550392

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NPA28_RS17965 (NPA28_17965)	-	3539487..3539906 (-)	420	WP_217827494.1	TIGR03826 family flagellar region protein	-
NPA28_RS17970 (NPA28_17970)	comFC	3539980..3540702 (-)	723	WP_217827493.1	phosphoribosyltransferase family protein	Machinery gene
NPA28_RS17975 (NPA28_17975)	-	3540666..3540962 (-)	297	WP_044159464.1	late competence development ComFB family protein	-
NPA28_RS17980 (NPA28_17980)	comFA	3541019..3542413 (-)	1395	WP_217827492.1	ATP-dependent helicase ComFA	Machinery gene
NPA28_RS17985 (NPA28_17985)	-	3542521..3543366 (-)	846	WP_044159470.1	DegV family protein	-
NPA28_RS17990 (NPA28_17990)	degU	3543463..3544152 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
NPA28_RS17995 (NPA28_17995)	degS	3544235..3545392 (-)	1158	WP_044159475.1	two-component sensor histidine kinase DegS	Regulator
NPA28_RS18000 (NPA28_18000)	-	3545609..3546262 (+)	654	WP_044159478.1	YigZ family protein	-
NPA28_RS18005 (NPA28_18005)	-	3546262..3547440 (+)	1179	WP_202657927.1	LCP family protein	-
NPA28_RS18010 (NPA28_18010)	-	3547515..3548591 (-)	1077	WP_044159481.1	glycosyltransferase family 4 protein	-
NPA28_RS18015 (NPA28_18015)	-	3548735..3549925 (-)	1191	WP_083510160.1	glycosyltransferase family 1 protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44844.64 Da
• Isoelectric Point: 6.5297

>NTDB_id=711792 NPA28_RS17995 WP_044159475.1 3544235..3545392(-) (degS) [Bacillus halotolerans strain S-5]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTEDKRLAPQFEVALFRLAQEAVSNALKHSGSEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKETKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=711792 NPA28_RS17995 WP_044159475.1 3544235..3545392(-) (degS) [Bacillus halotolerans strain S-5]
ATGAATAAAACAAAGATGGATTCCAAAGTTCTGGACTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
TGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TTTATGAAGTCATCGAGCTTGGTGATAAACTTGAAGTGCAAACCCGCCATGCGCGAAACCGTTTATCCGAGGTCAGCCGC
AATTTTCATAGATTCAGTGAAGAAGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAAGTCGAACTGACAATGAT
CCAGCAGCGTGAAAAGCAATTGCGCGAACGCCGGGACGATTTGGAACGCAGACTGTTAGGCCTTCAGGAAATCATCGAAC
GCTCAGAATCACTAGTGAGCCAGATTACGGTCGTGCTGAACTATCTGAATCAGGATCTTCGGGAGGTTGGGCTGCTTCTT
GCCGATGCGCAGGCAAAACAGGATTTTGGCTTGAGAATTATTGAAGCGCAGGAAGAAGAGAGAAAAAGAGTCTCGAGAGA
AATTCACGACGGTCCTGCACAAATGCTGGCAAATGTTATGATGAGATCGGAATTAATTGAACGGATTTTCCGAGACCGAG
GCGCTGAAGACGGATTCCAGGAAATCAAAAATCTCCGCCAAAATGTGCGGAATGCTCTTTACGAAGTGAGACGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTGCGGAAATATCTATATACAACCGAAGAATA
TAACGGTAAGGTGAAAATACATTTTCAGTGCATCGGCGATACGGAGGACAAACGACTCGCGCCTCAGTTTGAAGTTGCGC
TCTTCAGACTCGCACAGGAAGCTGTATCCAATGCGTTAAAGCATTCTGGATCTGAAGAAATTACAGTCAAAGTTGAGATT
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGCAAAGGATTTGACCTGAAGGAAGCGAAAGAGACGAAAAACAA
ATCATTCGGCTTGCTTGGAATGAAAGAAAGAGTAGATTTATTGGAAGGAACCATGACTATAGATTCAAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	98.961	100	0.99