Detailed information NTG0711464

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: NO220_RS16735
• Genome accession: NZ_CP101661
• Coordinates: 3387589..3388752 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain B408
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3382589..3393752

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NO220_RS16705 (NO220_16705)	-	3382854..3383273 (-)	420	WP_043867469.1	TIGR03826 family flagellar region protein	-
NO220_RS16710 (NO220_16710)	comFC	3383347..3384036 (-)	690	WP_196769287.1	phosphoribosyltransferase family protein	Machinery gene
NO220_RS16715 (NO220_16715)	-	3384042..3384326 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
NO220_RS16720 (NO220_16720)	comFA	3384384..3385769 (-)	1386	WP_043867470.1	DEAD/DEAH box helicase	Machinery gene
NO220_RS16725 (NO220_16725)	-	3385877..3386725 (-)	849	WP_043867471.1	DegV family protein	-
NO220_RS16730 (NO220_16730)	degU	3386823..3387512 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
NO220_RS16735 (NO220_16735)	degS	3387589..3388752 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
NO220_RS16740 (NO220_16740)	-	3388975..3389622 (+)	648	WP_043867472.1	YigZ family protein	-
NO220_RS16745 (NO220_16745)	-	3389627..3390841 (+)	1215	WP_043867473.1	LCP family protein	-
NO220_RS16750 (NO220_16750)	-	3390931..3392007 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
NO220_RS16755 (NO220_16755)	-	3392140..3393336 (-)	1197	WP_003151381.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=711464 NO220_RS16735 WP_003151385.1 3387589..3388752(-) (degS) [Bacillus amyloliquefaciens strain B408]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=711464 NO220_RS16735 WP_003151385.1 3387589..3388752(-) (degS) [Bacillus amyloliquefaciens strain B408]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGGGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GTACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948