Detailed information NTG0711225

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: NN994_RS06645
• Genome accession: NZ_CP101646
• Coordinates: 1275654..1276580 (-)
• Length: 308 a.a.
• NCBI ID: WP_064355560.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain UCCSt95
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1270654..1281580

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NN994_RS06615 (NN994_06620)	-	1270731..1271525 (-)	795	WP_064355552.1	HAD-IIB family hydrolase	-
NN994_RS06620 (NN994_06625)	-	1271710..1272087 (+)	378	WP_011681413.1	GntR family transcriptional regulator	-
NN994_RS06625 (NN994_06630)	-	1272092..1272790 (+)	699	WP_064355553.1	ABC transporter ATP-binding protein	-
NN994_RS06630 (NN994_06635)	-	1272802..1273587 (+)	786	WP_011681414.1	hypothetical protein	-
NN994_RS06635 (NN994_06640)	amiF	1273637..1274566 (-)	930	WP_064355555.1	ATP-binding cassette domain-containing protein	Regulator
NN994_RS06640 (NN994_06645)	amiE	1274559..1275644 (-)	1086	WP_064355558.1	ABC transporter ATP-binding protein	Regulator
NN994_RS06645 (NN994_06650)	amiD	1275654..1276580 (-)	927	WP_064355560.1	oligopeptide ABC transporter permease OppC	Regulator
NN994_RS06650 (NN994_06655)	amiC	1276580..1278073 (-)	1494	WP_064355564.1	ABC transporter permease	Regulator
NN994_RS06655 (NN994_06660)	amiA3	1278134..1280104 (-)	1971	WP_064355565.1	peptide ABC transporter substrate-binding protein	Regulator
NN994_RS06660 (NN994_06665)	-	1280340..1280530 (-)	191	Protein_1254	IS3 family transposase	-
NN994_RS09600 (NN994_06670)	-	1280521..1280933 (-)	413	Protein_1255	ATP-binding cassette domain-containing protein	-
NN994_RS09605 (NN994_06675)	-	1280965..1281279 (-)	315	Protein_1256	TatD family hydrolase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34650.80 Da
• Isoelectric Point: 9.7054

>NTDB_id=711225 NN994_RS06645 WP_064355560.1 1275654..1276580(-) (amiD) [Streptococcus thermophilus strain UCCSt95]
MASIDKSKFQFVKRDDFASETIDAPSYSYWKSVMRQFFKKKSTVVMLGILIAIVLMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDGNGKSLFDSVWFGARNSILIAVIATFLNVIIGLLVGAVWGISKTFDMIMMEIYNIISNIPSLLVVIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRNLGTPTAKIVIKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=711225 NN994_RS06645 WP_064355560.1 1275654..1276580(-) (amiD) [Streptococcus thermophilus strain UCCSt95]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGTCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAATCAACAGTTGTAATGTTGGGAATCTTGATTGCTATTG
TTTTGATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAATGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACGGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTTGGGGC
TCGTAATTCTATCCTTATCGCTGTTATCGCTACCTTCCTGAATGTTATAATTGGTTTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCCTCTCTCCTTGTGGTTATCGTC
TTGACTTACTCATTAGGTGCTGGTTTTTGGAATATGATTTTTGCCATGACCGTAACAGGTTGGATTGGTATTGCCTACAC
AATCCGTATTCAAATCATGCGTTATCGTGATTTGGAGTATAACTTGGCTTCTCGCAATTTGGGAACACCAACGGCTAAGA
TTGTGATTAAAAATATCATGCCACAACTTGTGTCAGTTATTGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTCCTTTCATACTTTGGTTTGGGTCTTCCTGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAACGTTACAGTCAATGCCTATCTCTTCTGGATTCCATTGACTACCTTGATTCTTGTTTCTCTTGCCCTCTTTATTG
TTGGTCAAAACTTAGCGGATGCTAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterproScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	99.351	100	0.994
amiD	Streptococcus thermophilus LMD-9	99.351	100	0.994
amiD	Streptococcus salivarius strain HSISS4	96.429	100	0.964