Detailed information NTG0071115

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: K6J64_RS03595
• Genome accession: NZ_AP018775
• Coordinates: 703314..704006 (+)
• Length: 230 a.a.
• NCBI ID: WP_014550482.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain CHBN-III-4 isolate 12H35
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 698314..709006

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J64_RS03575 (CHBNIII4_06860)	ampD	699588..700148 (-)	561	WP_014550480.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
K6J64_RS03580 (CHBNIII4_06870)	pilA	700263..700712 (+)	450	WP_011271973.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	Machinery gene
K6J64_RS03585 (CHBNIII4_06880)	pilB	700709..702103 (+)	1395	WP_011271972.1	GspE/PulE family protein	Machinery gene
K6J64_RS03590 (CHBNIII4_06890)	pilC	702100..703317 (+)	1218	WP_014550481.1	type II secretion system F family protein	Machinery gene
K6J64_RS03595 (CHBNIII4_06900)	pilD	703314..704006 (+)	693	WP_014550482.1	A24 family peptidase	Machinery gene
K6J64_RS03600 (CHBNIII4_06910)	rho	704060..705322 (-)	1263	WP_005648966.1	transcription termination factor Rho	-
K6J64_RS03605 (CHBNIII4_06920)	metJ	705570..705887 (+)	318	WP_005631186.1	met regulon transcriptional regulator MetJ	-
K6J64_RS03610 (CHBNIII4_06930)	cueR	705901..706287 (-)	387	WP_005648963.1	Cu(I)-responsive transcriptional regulator	-
K6J64_RS03615 (CHBNIII4_06940)	-	706364..706570 (+)	207	WP_005666692.1	heavy-metal-associated domain-containing protein	-
K6J64_RS03620 (CHBNIII4_06950)	-	706656..706862 (+)	207	WP_005666693.1	heavy-metal-associated domain-containing protein	-
K6J64_RS03625 (CHBNIII4_06960)	-	706936..707142 (+)	207	WP_005666693.1	heavy-metal-associated domain-containing protein	-
K6J64_RS03630 (CHBNIII4_06970)	-	707216..707422 (+)	207	WP_005666693.1	heavy-metal-associated domain-containing protein	-

Sequence

Protein

• Length: 230 a.a.
• Molecular weight: 26683.67 Da
• Isoelectric Point: 8.5626

>NTDB_id=71115 K6J64_RS03595 WP_014550482.1 703314..704006(+) (pilD) [Haemophilus influenzae strain CHBN-III-4 isolate 12H35]
MIYFTMFLLGGILGIALWFYLSGFITRLQQEIYATYIELFPQNFLSFQPSVSSIQQKKCGHILRYFLNVGVEFIFLQIAF
KDSTFAIWLGLTLLILWAISYLDWHYQLISTTLCLWLLTIGLFGADNNFSLLTLSESIKSAASFFIVFYAIYWIAKFYYG
KEAFGRGDYWLAMALGSFIHLETLPHFLLLASVLGICFSLIHKKKKEFIPFAPFMNLSAVIIYFVKYYGY

Nucleotide

• Length: 693 bp

>NTDB_id=71115 K6J64_RS03595 WP_014550482.1 703314..704006(+) (pilD) [Haemophilus influenzae strain CHBN-III-4 isolate 12H35]
ATGATTTACTTCACAATGTTTTTATTAGGCGGTATCTTAGGGATCGCATTGTGGTTCTACCTATCTGGTTTTATTACCCG
TTTACAGCAAGAGATTTATGCGACTTATATTGAATTATTTCCACAAAACTTTCTGTCATTTCAGCCTAGCGTTTCCTCTA
TTCAACAAAAAAAGTGCGGTCATATTTTGAGGTATTTTTTAAATGTTGGGGTAGAATTTATATTTTTACAAATTGCCTTC
AAGGACTCTACTTTCGCTATATGGCTAGGGCTCACACTTCTTATCCTTTGGGCAATCAGTTATCTTGATTGGCACTATCA
ACTTATTTCTACTACACTCTGTTTATGGCTACTTACAATCGGTTTATTTGGAGCAGACAATAATTTTTCATTGCTTACGT
TATCTGAAAGCATAAAAAGTGCGGCAAGTTTTTTTATTGTTTTCTACGCAATCTATTGGATTGCAAAATTCTATTACGGA
AAAGAAGCCTTTGGACGGGGAGATTATTGGCTAGCAATGGCATTAGGAAGTTTTATTCATTTAGAAACCTTACCGCACTT
TTTATTATTAGCCTCAGTTCTTGGAATATGTTTTTCGCTTATTCATAAAAAGAAAAAAGAATTTATACCTTTTGCCCCTT
TTATGAACTTATCAGCTGTCATCATTTATTTCGTCAAATATTACGGATATTAA

Domains

Predicted by InterproScan.

• Type IV leader peptidase family (Peptidase_A24) (92-199)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Haemophilus influenzae 86-028NP	89.565	100	0.896
pilD	Haemophilus influenzae Rd KW20	89.13	100	0.891