Detailed information NTG0711061

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: DWB40_RS04115
• Genome accession: NZ_CP101622
• Coordinates: 934339..935712 (-)
• Length: 457 a.a.
• NCBI ID: WP_062605786.1
• Uniprot ID: -
• Organism: Stenotrophomonas maltophilia strain CYZ
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 929339..940712

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DWB40_RS04095	pilC	929651..930910 (-)	1260	WP_062605780.1	type II secretion system F family protein	Machinery gene
DWB40_RS04100	-	931263..931697 (+)	435	WP_062605782.1	pilin	-
DWB40_RS04105	-	931850..932257 (+)	408	WP_062605784.1	pilin	-
DWB40_RS04110	pilB	932480..934213 (+)	1734	WP_062605785.1	type IV-A pilus assembly ATPase PilB	Machinery gene
DWB40_RS04115	pilR	934339..935712 (-)	1374	WP_062605786.1	sigma-54 dependent transcriptional regulator	Regulator
DWB40_RS04120	-	935773..937386 (-)	1614	WP_062605787.1	ATP-binding protein	-
DWB40_RS04125	sucC	937744..938913 (+)	1170	WP_004154430.1	ADP-forming succinate--CoA ligase subunit beta	-
DWB40_RS04130	sucD	938935..939810 (+)	876	WP_005410793.1	succinate--CoA ligase subunit alpha	-

Sequence

Protein

• Length: 457 a.a.
• Molecular weight: 49527.82 Da
• Isoelectric Point: 6.4407

>NTDB_id=711061 DWB40_RS04115 WP_062605786.1 934339..935712(-) (pilR) [Stenotrophomonas maltophilia strain CYZ]
MNETRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCITDMRLPDGNGIELVSEIAQHYPRTPVA
MITAFGSMDLAVEALKAGAFDFVSKPVDIAVLRGLVKHALELNNAERPVPGPNAEQGGRLLGHSQAMDVLRTTIGKVARS
QAPVYILGESGVGKELVARTIHAQGARAAGPFVPVNCGAIPGELMESEFFGHRKGSFSGAHADKPGLFQAAHGGTLFLDE
VAELPLQMQVKLLRAIQEKSVRAVGAANEEPVDVRILSATHKDLAELVEDGRFRHDLYYRINVIELKVPPLRERRQDLPE
LAAAVLARLARSHGRATPLLAPSALEALAQYAFPGNVRELENILERALALAEEDCIGADDLRLPQHAPRAPGSAAPAEAV
ADLQPGSAALPSYIEQLERSAIQRALEENRWNKTRTAAQLGITFRALRYKLKKLGME

Nucleotide

• Length: 1374 bp

>NTDB_id=711061 DWB40_RS04115 WP_062605786.1 934339..935712(-) (pilR) [Stenotrophomonas maltophilia strain CYZ]
ATGAATGAAACCCGCAGCGCCCTCGTCGTCGACGACGAACGCGACATCCGCGAACTGCTGGTGCTGACCCTCGGCCGCAT
GGGGCTGCGCATCAGTACCGCCGCCAACCTGGCCGAGGCACGTGAGCTGCTGGCCAGCAATCCGTACGACCTGTGCATCA
CCGACATGCGCCTGCCGGATGGCAACGGCATCGAGCTGGTCAGCGAGATCGCCCAGCACTACCCGCGCACGCCGGTTGCG
ATGATCACCGCGTTCGGCAGCATGGATCTCGCCGTGGAGGCGCTGAAGGCCGGCGCGTTCGATTTCGTCAGCAAGCCGGT
GGACATCGCGGTGCTGCGCGGACTGGTCAAGCACGCGCTGGAACTCAACAACGCCGAGCGCCCGGTACCGGGCCCCAACG
CCGAACAGGGCGGGCGCCTGCTTGGCCACTCACAGGCCATGGATGTGCTGCGCACCACCATCGGCAAGGTCGCGCGCAGC
CAGGCGCCGGTCTACATCCTCGGCGAGTCGGGTGTCGGCAAGGAGCTGGTCGCACGCACCATCCATGCGCAGGGCGCACG
CGCGGCCGGCCCGTTCGTGCCGGTCAACTGCGGCGCCATTCCCGGCGAGCTGATGGAGAGCGAATTCTTCGGCCACCGCA
AGGGCAGTTTCAGCGGCGCGCACGCCGACAAGCCCGGCCTGTTCCAGGCGGCGCACGGCGGCACCCTGTTCCTGGACGAA
GTGGCTGAACTGCCACTGCAGATGCAGGTGAAGCTGCTGCGCGCGATCCAGGAAAAGTCGGTGCGCGCGGTGGGGGCGGC
CAACGAGGAGCCGGTAGATGTCCGCATCCTCTCGGCCACCCACAAGGATCTGGCCGAGCTGGTCGAGGACGGACGCTTCC
GCCACGACCTGTACTACCGCATCAACGTGATCGAACTGAAGGTGCCACCGCTGCGCGAGCGCCGCCAGGACCTGCCGGAG
CTGGCCGCCGCCGTGCTGGCCCGATTGGCCCGCAGCCACGGCCGTGCCACCCCGCTGCTGGCGCCGTCGGCGCTGGAAGC
GCTGGCGCAGTACGCGTTCCCGGGCAATGTGCGCGAGCTGGAGAACATCCTGGAACGTGCGCTGGCCCTGGCCGAGGAAG
ACTGCATCGGCGCCGATGACCTGCGCCTGCCGCAGCACGCGCCGCGTGCACCCGGCAGCGCGGCGCCCGCCGAAGCGGTG
GCCGACCTGCAGCCGGGCAGCGCCGCCCTGCCCTCCTACATCGAGCAGCTCGAGCGCAGCGCCATCCAGCGTGCGCTGGA
AGAGAACCGCTGGAACAAGACCCGTACTGCCGCGCAGCTGGGCATCACCTTCCGTGCGCTGCGCTACAAGCTGAAGAAGC
TGGGGATGGAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (414-454)

• Response regulator receiver domain (Response_reg) (8-115)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	63.158	99.781	0.63
pilR	Acinetobacter baumannii strain A118	48.38	100	0.49
luxO	Vibrio cholerae strain A1552	37.303	97.374	0.363