Detailed information NTG0071088

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: M2043_RS01210
• Genome accession: NZ_AP023433
• Coordinates: 247969..248994 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain M719
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 242969..253994

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M2043_RS01180 (MYEC719_0225)	zapB	243053..243298 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
M2043_RS01185 (MYEC719_0226)	rraA	243383..243868 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
M2043_RS01190 (MYEC719_0227)	menA	243961..244887 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
M2043_RS01195 (MYEC719_0228)	hslU	244954..246285 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
M2043_RS01200 (MYEC719_0229)	hslV	246295..246825 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
M2043_RS01205 (MYEC719_0230)	ftsN	246918..247877 (-)	960	WP_000068828.1	cell division protein FtsN	-
M2043_RS01210 (MYEC719_0231)	cytR	247969..248994 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
M2043_RS01215 (MYEC719_0232)	priA	249150..251348 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
M2043_RS01220 (MYEC719_0233)	rpmE	251551..251763 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
M2043_RS01225 (MYEC719_0234)	yiiX	251824..252432 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
M2043_RS01230 (MYEC719_0235)	metJ	252616..252933 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=71088 M2043_RS01210 WP_000644904.1 247969..248994(-) (cytR) [Escherichia coli strain M719]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=71088 M2043_RS01210 WP_000644904.1 247969..248994(-) (cytR) [Escherichia coli strain M719]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628