Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   PGH47_RS11840 Genome accession   NZ_CP116353
Coordinates   2680008..2681093 (+) Length   361 a.a.
NCBI ID   WP_271663385.1    Uniprot ID   -
Organism   Streptomyces sp. HUAS 31     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2675008..2686093
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PGH47_RS11810 (PGH47_11810) - 2675014..2675694 (-) 681 WP_271663382.1 response regulator transcription factor -
  PGH47_RS11815 (PGH47_11815) - 2675777..2676994 (-) 1218 WP_271663383.1 sensor histidine kinase -
  PGH47_RS11820 (PGH47_11820) - 2677093..2677371 (-) 279 WP_271668031.1 hypothetical protein -
  PGH47_RS11825 (PGH47_11825) - 2677420..2678187 (-) 768 WP_260609300.1 PspA/IM30 family protein -
  PGH47_RS11830 (PGH47_11830) - 2678489..2679127 (+) 639 WP_125525241.1 DUF3043 domain-containing protein -
  PGH47_RS11835 (PGH47_11835) - 2679211..2679951 (+) 741 WP_271663384.1 methyltransferase domain-containing protein -
  PGH47_RS11840 (PGH47_11840) htrA 2680008..2681093 (+) 1086 WP_271663385.1 trypsin-like peptidase domain-containing protein Regulator
  PGH47_RS11845 (PGH47_11845) - 2681131..2681340 (-) 210 WP_030967709.1 hypothetical protein -
  PGH47_RS11850 (PGH47_11850) - 2681456..2682658 (+) 1203 WP_271663386.1 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase -
  PGH47_RS11855 (PGH47_11855) - 2682772..2683593 (-) 822 WP_271663387.1 class I SAM-dependent methyltransferase -
  PGH47_RS11860 (PGH47_11860) cobT 2683808..2684917 (+) 1110 WP_271663388.1 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase -
  PGH47_RS11865 (PGH47_11865) - 2684972..2685676 (+) 705 WP_271663389.1 hypothetical protein -

Sequence


Protein


Download         Length: 361 a.a.        Molecular weight: 37042.27 Da        Isoelectric Point: 4.3115

>NTDB_id=709517 PGH47_RS11840 WP_271663385.1 2680008..2681093(+) (htrA) [Streptomyces sp. HUAS 31]
MDARRLRTRRPVVAVLALLCCLGLLSACSSSPFSSSSREEGDSTTQAALPRTPRAVDDLQDGYLKVIRSVLPSVVQIQGR
RDLGSGVVYDDQGHIVTNAHVVGDEKTFRVTTAGSEKELTAQLVSSYPQQDLAVVKLQDPPDGLKAAKFGDSSKVEVGQI
VLAMGSPLGLSSSVTQGIVSATGRTVTEGGDGTTGATIANMVQTSAAINPGNSGGALVNLDSEVIGVPTLAAVDPDVGNS
AAPGIGFAIPASTVRNIADQIIEDGRVTDSGRAALGITGRTVVNDDYQAAGVAVVEVQEGGAADEAGLEPGDIITRLGDT
EITTITSLSEALAGDKPGDETTVTYTRDGDRKKADVTLGEQ

Nucleotide


Download         Length: 1086 bp        

>NTDB_id=709517 PGH47_RS11840 WP_271663385.1 2680008..2681093(+) (htrA) [Streptomyces sp. HUAS 31]
ATGGATGCTCGCCGTTTGCGGACCCGGCGTCCGGTCGTCGCGGTCCTCGCCCTGCTGTGCTGCCTCGGCCTCCTGTCGGC
CTGTTCGTCCTCCCCCTTCTCCTCGTCGTCGCGTGAGGAGGGGGACTCGACGACCCAGGCCGCCCTGCCGAGGACACCCC
GGGCGGTGGACGACCTCCAGGACGGCTATCTGAAGGTGATCAGGAGCGTGCTGCCGTCGGTCGTGCAGATCCAGGGCAGA
CGTGATCTGGGGTCGGGCGTGGTCTACGACGACCAGGGGCACATCGTCACCAACGCGCACGTCGTCGGCGACGAGAAGAC
CTTCCGGGTGACGACCGCCGGCAGCGAGAAGGAGCTCACCGCCCAGCTGGTGTCCTCCTATCCGCAGCAGGACCTCGCCG
TGGTCAAGCTCCAGGACCCGCCGGACGGGCTGAAGGCGGCGAAGTTCGGGGACTCCTCGAAGGTCGAGGTGGGGCAGATC
GTGCTGGCGATGGGCTCGCCGCTCGGGCTGTCGTCCAGCGTGACGCAGGGCATCGTCTCGGCGACCGGACGGACCGTCAC
CGAGGGCGGCGACGGCACCACGGGCGCGACGATCGCCAACATGGTCCAGACGTCTGCGGCCATCAACCCCGGCAACAGCG
GTGGCGCCCTGGTGAACCTCGACAGCGAGGTCATCGGCGTGCCGACGCTGGCCGCCGTGGACCCGGACGTCGGGAACAGC
GCGGCGCCCGGCATCGGGTTCGCGATCCCCGCGTCGACGGTGCGCAACATCGCCGACCAGATCATCGAGGACGGCCGGGT
CACCGACTCGGGCCGGGCCGCGCTCGGCATCACCGGCCGTACCGTCGTCAACGACGACTATCAGGCGGCCGGCGTGGCCG
TGGTCGAGGTGCAGGAGGGCGGGGCGGCCGACGAGGCCGGTCTGGAGCCCGGCGACATCATCACCCGGCTGGGGGACACG
GAGATCACCACCATCACCTCGCTGTCCGAGGCACTGGCCGGCGACAAGCCGGGGGACGAGACGACGGTGACCTACACCCG
CGACGGTGACCGGAAGAAGGCCGATGTGACGCTGGGCGAACAGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mitis NCTC 12261

34.301

100

0.36